Click here to switch to the map view.

The map label for this gene is 159897948

Identifier: 159897948

GI number: 159897948

Start: 1643657

End: 1644007

Strand: Reverse

Name: 159897948

Synonym: Haur_1423

Alternate gene names: NA

Gene position: 1644007-1643657 (Counterclockwise)

Preceding gene: 159897952

Following gene: 159897947

Centisome position: 25.9

GC content: 46.15

Gene sequence:

>351_bases
ATGGATATTAGCCATAAAGCCTATAATCGCGTTGATGTTATCACGGTGTCGGGGCGCTTGGCCGCAGAGACCAAAGATGC
CTTGAATGATAAGATTAACCAGATTTTTGAGGAAAATCGCCATCGGATTGTCCTCGACCTCGAAAACTTAGAGTATATCA
GCAGCCCTGGTTTACGGGTGTTGATCGAAGCTCGCAAAAAAGCTCGCGAATGGAAATTTAGTGAACTCGAACGTGGTGAT
GTGCGGATTGCCAATCTGCCTCAACGAATTCGCGAAGTATTCGACTTGACTGGCTTCACGCCATTGTTCCAAATTTATGA
CGACTTGGTGGAAGCTGTTGGTAGCTTCTAG

Upstream 100 bases:

>100_bases
ACTCGGCCAAAAGTTCCCTAAGAAATTAATACCGCTGTGCTATAATAGGCCACAGATTCGCCAAAATGTAACCCGCTTAC
AATGGTGGCAGGAGGAATGC

Downstream 100 bases:

>100_bases
ACGAATTTCGGTGAGACGATATGGCGCAAACCGCTGAACTTAAACTGCCAGGGCTGCTCGATTCGCTCGGTGCCCTGTGT
AAGTTTGCCTATCAGGCAGC

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Anti-Anti-Sigma Regulatory Factor; Anti-Sigma F Factor Antagonist; Anti-Anti-Sigma Regulatory Factor SpoIIAA; Anti-Anti-Sigma Factor

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MDISHKAYNRVDVITVSGRLAAETKDALNDKINQIFEENRHRIVLDLENLEYISSPGLRVLIEARKKAREWKFSELERGD
VRIANLPQRIREVFDLTGFTPLFQIYDDLVEAVGSF

Sequences:

>Translated_116_residues
MDISHKAYNRVDVITVSGRLAAETKDALNDKINQIFEENRHRIVLDLENLEYISSPGLRVLIEARKKAREWKFSELERGD
VRIANLPQRIREVFDLTGFTPLFQIYDDLVEAVGSF
>Mature_116_residues
MDISHKAYNRVDVITVSGRLAAETKDALNDKINQIFEENRHRIVLDLENLEYISSPGLRVLIEARKKAREWKFSELERGD
VRIANLPQRIREVFDLTGFTPLFQIYDDLVEAVGSF

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13448; Mature: 13448

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISHKAYNRVDVITVSGRLAAETKDALNDKINQIFEENRHRIVLDLENLEYISSPGLRV
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHH
LIEARKKAREWKFSELERGDVRIANLPQRIREVFDLTGFTPLFQIYDDLVEAVGSF
HHHHHHHHHCCCHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDISHKAYNRVDVITVSGRLAAETKDALNDKINQIFEENRHRIVLDLENLEYISSPGLRV
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCHHH
LIEARKKAREWKFSELERGDVRIANLPQRIREVFDLTGFTPLFQIYDDLVEAVGSF
HHHHHHHHHCCCHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA