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The map label for this gene is btrV [H]

Identifier: 159897947

GI number: 159897947

Start: 1642884

End: 1643636

Strand: Reverse

Name: btrV [H]

Synonym: Haur_1422

Alternate gene names: 159897947

Gene position: 1643636-1642884 (Counterclockwise)

Preceding gene: 159897948

Following gene: 159897946

Centisome position: 25.9

GC content: 52.59

Gene sequence:

>753_bases
ATGGCGCAAACCGCTGAACTTAAACTGCCAGGGCTGCTCGATTCGCTCGGTGCCCTGTGTAAGTTTGCCTATCAGGCAGC
ACTTGATGCTGGGCTTAACGAACATACGGCGTGGGAAATTGAATTGGCAGTTGATGAAGCTGCCACCAATATCATCCAAC
ACGCCTACTCTGCTGAACGTCCCGGTGATGTTCGCTTGGTCTGCGGACGCGATGGTAGCCGTTTTGTAGTACGGCTGTTC
GATCGCGGGGTTCCTTTTGATCCTGAAACTGTTCCTCCTCCAGATCTCACCTCATCAATCGAAACTCGCGAGGCTGGCGG
CCTCGGAATGTATTTGATGGGCAGGATGATGGATGATGTGCAATTCAATTACAATCCTGAAACTGGTGAAAACGAGTTAC
ACATGAGTAAAATCGTTGGGACACGACTGCCCGAAGATGTGCGGGTTGTGCCAGTTCAAGGCCGGATTGATGCCACGGCA
GCGCCAGCCTTAGCGACGATTGTCCATGAGGCTGCCGAAACTGGCGGGCGGCGCATCTTGCTTGATCTTACGGGCGTAAC
CTTTTTAAGCAGCAGCGGTCTGCGGATTTTGCTGTTGTTGGCTCGCGAACTCAAAGGCTCCAACGGCGAACTACGCTTGT
GTTCATTACAACCAGCGGTAGCCGAGGTCTTTACCCTGACAGGATTCACCCAAATCTTTACCATTCACCGCACTCGTGAT
GAAGCGCTTGCAGCGTTGGCAGATGTTGAGTAA

Upstream 100 bases:

>100_bases
GCGAAGTATTCGACTTGACTGGCTTCACGCCATTGTTCCAAATTTATGACGACTTGGTGGAAGCTGTTGGTAGCTTCTAG
ACGAATTTCGGTGAGACGAT

Downstream 100 bases:

>100_bases
GGTGCATGTTAGCCAGTTTTGATCGTGGAACCCGACTCTCGAAACATCGCATGGTGGCCCTTGGTTGGGCTACCATGCTC
TTTTTGTTGGCAAGTGCCAG

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAQTAELKLPGLLDSLGALCKFAYQAALDAGLNEHTAWEIELAVDEAATNIIQHAYSAERPGDVRLVCGRDGSRFVVRLF
DRGVPFDPETVPPPDLTSSIETREAGGLGMYLMGRMMDDVQFNYNPETGENELHMSKIVGTRLPEDVRVVPVQGRIDATA
APALATIVHEAAETGGRRILLDLTGVTFLSSSGLRILLLLARELKGSNGELRLCSLQPAVAEVFTLTGFTQIFTIHRTRD
EALAALADVE

Sequences:

>Translated_250_residues
MAQTAELKLPGLLDSLGALCKFAYQAALDAGLNEHTAWEIELAVDEAATNIIQHAYSAERPGDVRLVCGRDGSRFVVRLF
DRGVPFDPETVPPPDLTSSIETREAGGLGMYLMGRMMDDVQFNYNPETGENELHMSKIVGTRLPEDVRVVPVQGRIDATA
APALATIVHEAAETGGRRILLDLTGVTFLSSSGLRILLLLARELKGSNGELRLCSLQPAVAEVFTLTGFTQIFTIHRTRD
EALAALADVE
>Mature_249_residues
AQTAELKLPGLLDSLGALCKFAYQAALDAGLNEHTAWEIELAVDEAATNIIQHAYSAERPGDVRLVCGRDGSRFVVRLFD
RGVPFDPETVPPPDLTSSIETREAGGLGMYLMGRMMDDVQFNYNPETGENELHMSKIVGTRLPEDVRVVPVQGRIDATAA
PALATIVHEAAETGGRRILLDLTGVTFLSSSGLRILLLLARELKGSNGELRLCSLQPAVAEVFTLTGFTQIFTIHRTRDE
ALAALADVE

Specific function: Possible positive regulator of sigma-B activity. Non-phosphorylated BtrV binds to BtrW, preventing its association with an unknown partner(s) that might be sigma-B. When phosphorylated, releases BtrW, which is then free to complex with and inactivate its

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 27073; Mature: 26942

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTAELKLPGLLDSLGALCKFAYQAALDAGLNEHTAWEIELAVDEAATNIIQHAYSAER
CCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCC
PGDVRLVCGRDGSRFVVRLFDRGVPFDPETVPPPDLTSSIETREAGGLGMYLMGRMMDDV
CCCEEEEECCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHC
QFNYNPETGENELHMSKIVGTRLPEDVRVVPVQGRIDATAAPALATIVHEAAETGGRRIL
EECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
LDLTGVTFLSSSGLRILLLLARELKGSNGELRLCSLQPAVAEVFTLTGFTQIFTIHRTRD
EEECCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCHHHEEEEECCHH
EALAALADVE
HHHHHHHCCC
>Mature Secondary Structure 
AQTAELKLPGLLDSLGALCKFAYQAALDAGLNEHTAWEIELAVDEAATNIIQHAYSAER
CCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCC
PGDVRLVCGRDGSRFVVRLFDRGVPFDPETVPPPDLTSSIETREAGGLGMYLMGRMMDDV
CCCEEEEECCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHC
QFNYNPETGENELHMSKIVGTRLPEDVRVVPVQGRIDATAAPALATIVHEAAETGGRRIL
EECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
LDLTGVTFLSSSGLRILLLLARELKGSNGELRLCSLQPAVAEVFTLTGFTQIFTIHRTRD
EEECCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCHHHEEEEECCHH
EALAALADVE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]