Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897909

Identifier: 159897909

GI number: 159897909

Start: 1597189

End: 1598760

Strand: Reverse

Name: 159897909

Synonym: Haur_1383

Alternate gene names: NA

Gene position: 1598760-1597189 (Counterclockwise)

Preceding gene: 159897910

Following gene: 159897908

Centisome position: 25.19

GC content: 55.85

Gene sequence:

>1572_bases
ATGCCAACAGCCTTTGACAATCTCTCGGTCGAAGTCGCCAAAAAACGCTTGCCAACTACGCCGGAAGCGGTCAAAAGTGC
GGTGCTGTTTCGCGATGGCGATCACTGGCAGGGTGGGGCGGCGTGGACTGGTCCAGCTCCTGCGTCAACGGATAAAGGCG
CGACCGAGGTCATGACTCGCATTCAGCGCGAGTTTGTTTCCAGCAACGTGATTGCCGAGGTGATTGAGCGCCACGCCAAT
GCCGTGTGTGGCCGTGAACCCCAGTGGAGCTATGCCGTGCGTCGTCCGCTACTAGAGGAGGAACAACCCAATCCCCAAGA
GCAAGGTTTGCTTGATGAGGCCGAAGCCGCCATGACGAGTTGGTGGGATCAGCGCAATGTACTCGGTATCCTGCAAGAAA
GCATTGCCACCGCCGTGGTGCATGGTCGCGCCGTGCTCCGCTTGTTTGTTCCACCCGCCTATGTCGAAGACAACGTGATT
CAAGTCCAAGAAACCTTGGCCGATGCCTTGAACCTGATTTGGCTCGATTGGTTAGCGCCCGAGCAAGCAGGGGTGAGCCG
TGATAAAGCCACGATGCAGGCATGTGGGGTCTATGTCTATACGAATGACAATAAAAAAGAAGTCGCAGAAGTGACCTTTA
TCGATGAAGGCCAAACCGTGATGCGCACGCTCGAAGGCGAGGCAATGACTGGCGAAACACGGCTACCGCTGATGGGTCAT
TTGCTGATGATCGAAATCGTCTGCAAGCCCTTGATCGGGTTGTCCATGCAACAAATGCAGAAGGCGCTCAATATGACCCT
GACCATGCTCCAACACAACATTGTGATTAGTGGCTTTGTTGAGCGGGTCATGACCAATGCTCAAATGCCGTTTGATGAAG
TAGACGACCCGGCCAACCCGGGTAAAAAGTTGCGGGTGTATCGCCCGTATGACATCGGGCCGGGCAAAACCACCAATTTA
ATTGGGCTGCCGATGCGTGAAAAAGATGGGCAGATTGAGCGCATCACGGGTTACACCACCCCATCGGTGCAATGGCGTGA
ACCCGTTCCCGTTGGCACGTTCATCGATACCGACGCAGCGATTTATAGCCGGATGCTCAAGGAGTGCAAGCAACTGCATG
CGCTGCTGAGTGGTGACGCGGTGGCGAGTGGGGAAAGCCGCAAACAAGCGTTGTTGGATTTTGCGATGTCGCTTGGGCCA
ACGGCCACGGCCCTCAAGCAGCTGGTGCGCTGGGTGCTCGAAGCGGCCCTCGCGTTGGCGGCGCATTTTGCAGGTCGTGC
TCAAGCCTTTGATAGTCTCCGCGCCGATGTCACGCCACGGTTGTGGCTGGGTAGCCTGAGCAGCGAGGAACGCAACTTTT
TATTGGCCGCCTATGAAAAAGGGGCCATTAGTCACGACCTGTTCTTGAGTCTGATTGATGTTGAAGATGTCGATGCTGAA
AAGGCTCGCATTGCTGCCGAGCAGGAAGAAAAGCAGGCTCGTAGCGCTCGAAGTTTAGGCGCAGCCTTGGCAATGCAGCA
AGCGCGACTTGATAGTGGTGCTGCTAGCACCGGATTGGAGCAGCCCGCATGA

Upstream 100 bases:

>100_bases
TCGTGATGGCATGGGCCATTGCCCTGATGGTTGCCAGTCAACCAATGGAAGTCGAAGACGAAGCCATGGCTGGCTCGTGG
AATAGCTACTAGAGGTATCG

Downstream 100 bases:

>100_bases
TCGACGCGGTTGCCATTGCCAATCAATTCCGTGCTGAGCTTCAGGCGCAGAACGCGAGTGCGATGGACGCGCTGACCACA
CGCTGGCGCACGGTCGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MPTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHAN
AVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVI
QVQETLADALNLIWLDWLAPEQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH
LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANPGKKLRVYRPYDIGPGKTTNL
IGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGP
TATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA

Sequences:

>Translated_523_residues
MPTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHAN
AVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVI
QVQETLADALNLIWLDWLAPEQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH
LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANPGKKLRVYRPYDIGPGKTTNL
IGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGP
TATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA
>Mature_522_residues
PTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHANA
VCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVIQ
VQETLADALNLIWLDWLAPEQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGHL
LMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANPGKKLRVYRPYDIGPGKTTNLI
GLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPT
ATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAEK
ARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57462; Mature: 57331

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTR
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IQREFVSSNVIAEVIERHANAVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHCCCCCCCHHCCCHHHHHHHHHH
WWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVIQVQETLADALNLIWLDWLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCC
EQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH
CCCCCCHHHHHHHHCCEEEEECCCHHHEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHH
LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
GKKLRVYRPYDIGPGKTTNLIGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAA
CCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCHHH
IYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPTATALKQLVRWVLEAALALA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE
HHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEECCCCCCHHHHHEEECCCCCCHH
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTR
CCCCCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IQREFVSSNVIAEVIERHANAVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHCCCCCCCHHCCCHHHHHHHHHH
WWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVIQVQETLADALNLIWLDWLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCC
EQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH
CCCCCCHHHHHHHHCCEEEEECCCHHHEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHH
LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
GKKLRVYRPYDIGPGKTTNLIGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAA
CCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCHHH
IYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPTATALKQLVRWVLEAALALA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE
HHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEECCCCCCHHHHHEEECCCCCCHH
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA