| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897909
Identifier: 159897909
GI number: 159897909
Start: 1597189
End: 1598760
Strand: Reverse
Name: 159897909
Synonym: Haur_1383
Alternate gene names: NA
Gene position: 1598760-1597189 (Counterclockwise)
Preceding gene: 159897910
Following gene: 159897908
Centisome position: 25.19
GC content: 55.85
Gene sequence:
>1572_bases ATGCCAACAGCCTTTGACAATCTCTCGGTCGAAGTCGCCAAAAAACGCTTGCCAACTACGCCGGAAGCGGTCAAAAGTGC GGTGCTGTTTCGCGATGGCGATCACTGGCAGGGTGGGGCGGCGTGGACTGGTCCAGCTCCTGCGTCAACGGATAAAGGCG CGACCGAGGTCATGACTCGCATTCAGCGCGAGTTTGTTTCCAGCAACGTGATTGCCGAGGTGATTGAGCGCCACGCCAAT GCCGTGTGTGGCCGTGAACCCCAGTGGAGCTATGCCGTGCGTCGTCCGCTACTAGAGGAGGAACAACCCAATCCCCAAGA GCAAGGTTTGCTTGATGAGGCCGAAGCCGCCATGACGAGTTGGTGGGATCAGCGCAATGTACTCGGTATCCTGCAAGAAA GCATTGCCACCGCCGTGGTGCATGGTCGCGCCGTGCTCCGCTTGTTTGTTCCACCCGCCTATGTCGAAGACAACGTGATT CAAGTCCAAGAAACCTTGGCCGATGCCTTGAACCTGATTTGGCTCGATTGGTTAGCGCCCGAGCAAGCAGGGGTGAGCCG TGATAAAGCCACGATGCAGGCATGTGGGGTCTATGTCTATACGAATGACAATAAAAAAGAAGTCGCAGAAGTGACCTTTA TCGATGAAGGCCAAACCGTGATGCGCACGCTCGAAGGCGAGGCAATGACTGGCGAAACACGGCTACCGCTGATGGGTCAT TTGCTGATGATCGAAATCGTCTGCAAGCCCTTGATCGGGTTGTCCATGCAACAAATGCAGAAGGCGCTCAATATGACCCT GACCATGCTCCAACACAACATTGTGATTAGTGGCTTTGTTGAGCGGGTCATGACCAATGCTCAAATGCCGTTTGATGAAG TAGACGACCCGGCCAACCCGGGTAAAAAGTTGCGGGTGTATCGCCCGTATGACATCGGGCCGGGCAAAACCACCAATTTA ATTGGGCTGCCGATGCGTGAAAAAGATGGGCAGATTGAGCGCATCACGGGTTACACCACCCCATCGGTGCAATGGCGTGA ACCCGTTCCCGTTGGCACGTTCATCGATACCGACGCAGCGATTTATAGCCGGATGCTCAAGGAGTGCAAGCAACTGCATG CGCTGCTGAGTGGTGACGCGGTGGCGAGTGGGGAAAGCCGCAAACAAGCGTTGTTGGATTTTGCGATGTCGCTTGGGCCA ACGGCCACGGCCCTCAAGCAGCTGGTGCGCTGGGTGCTCGAAGCGGCCCTCGCGTTGGCGGCGCATTTTGCAGGTCGTGC TCAAGCCTTTGATAGTCTCCGCGCCGATGTCACGCCACGGTTGTGGCTGGGTAGCCTGAGCAGCGAGGAACGCAACTTTT TATTGGCCGCCTATGAAAAAGGGGCCATTAGTCACGACCTGTTCTTGAGTCTGATTGATGTTGAAGATGTCGATGCTGAA AAGGCTCGCATTGCTGCCGAGCAGGAAGAAAAGCAGGCTCGTAGCGCTCGAAGTTTAGGCGCAGCCTTGGCAATGCAGCA AGCGCGACTTGATAGTGGTGCTGCTAGCACCGGATTGGAGCAGCCCGCATGA
Upstream 100 bases:
>100_bases TCGTGATGGCATGGGCCATTGCCCTGATGGTTGCCAGTCAACCAATGGAAGTCGAAGACGAAGCCATGGCTGGCTCGTGG AATAGCTACTAGAGGTATCG
Downstream 100 bases:
>100_bases TCGACGCGGTTGCCATTGCCAATCAATTCCGTGCTGAGCTTCAGGCGCAGAACGCGAGTGCGATGGACGCGCTGACCACA CGCTGGCGCACGGTCGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MPTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHAN AVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVI QVQETLADALNLIWLDWLAPEQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANPGKKLRVYRPYDIGPGKTTNL IGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGP TATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA
Sequences:
>Translated_523_residues MPTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHAN AVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVI QVQETLADALNLIWLDWLAPEQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANPGKKLRVYRPYDIGPGKTTNL IGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGP TATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA >Mature_522_residues PTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHANA VCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVIQ VQETLADALNLIWLDWLAPEQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGHL LMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANPGKKLRVYRPYDIGPGKTTNLI GLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPT ATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAEK ARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57462; Mature: 57331
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTR CCCCCCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH IQREFVSSNVIAEVIERHANAVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHCCCCCCCHHCCCHHHHHHHHHH WWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVIQVQETLADALNLIWLDWLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCC EQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH CCCCCCHHHHHHHHCCEEEEECCCHHHEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHH LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC GKKLRVYRPYDIGPGKTTNLIGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAA CCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCHHH IYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPTATALKQLVRWVLEAALALA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE HHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEECCCCCCHHHHHEEECCCCCCHH KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PTAFDNLSVEVAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTR CCCCCCCHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH IQREFVSSNVIAEVIERHANAVCGREPQWSYAVRRPLLEEEQPNPQEQGLLDEAEAAMTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHCCCCCCCHHCCCHHHHHHHHHH WWDQRNVLGILQESIATAVVHGRAVLRLFVPPAYVEDNVIQVQETLADALNLIWLDWLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHCCCHHHHHHHHHHHHHHHHHHHCCC EQAGVSRDKATMQACGVYVYTNDNKKEVAEVTFIDEGQTVMRTLEGEAMTGETRLPLMGH CCCCCCHHHHHHHHCCEEEEECCCHHHEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHH LLMIEIVCKPLIGLSMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPANP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC GKKLRVYRPYDIGPGKTTNLIGLPMREKDGQIERITGYTTPSVQWREPVPVGTFIDTDAA CCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCHHH IYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPTATALKQLVRWVLEAALALA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIDVEDVDAE HHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEECCCCCCHHHHHEEECCCCCCHH KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA