Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897882

Identifier: 159897882

GI number: 159897882

Start: 1570624

End: 1570926

Strand: Direct

Name: 159897882

Synonym: Haur_1356

Alternate gene names: NA

Gene position: 1570624-1570926 (Clockwise)

Preceding gene: 159897881

Following gene: 159897883

Centisome position: 24.75

GC content: 58.42

Gene sequence:

>303_bases
ATGGGCAATATTGGCAATGGCGAAAAGGCAGCGGGAGCAACCGTAGCAGTCGCTACGGTGGAACCTTCGACCAACTCAGT
GACGAGCGCAAAGCGGCCTACGAAGCGCACAAACAACGCCGTGCTGCGACAGATCAAACCGGTGAGCCAACAGGAAGCGC
TGGAGATGTTGCGGAGCGCCTTGGTGTATTTACAGCTGAGCGGAGTGCAAGCGCGGTATCGGACGACCGAGGTGGGCTTA
CTGCTTCAGCTTGATGCGGTCTATCTCGATGGCGTGCGCTTCGCCGTGCGCGATTGCATCTGA

Upstream 100 bases:

>100_bases
GCAATGAGGGTTGATGATGGTGGCAACATCGGATTTCTTGATCTTCCGCTCTTAATAGATACGTTCAATCCGTTGGATTG
GCGTACCGAGGTGAAAGGTA

Downstream 100 bases:

>100_bases
TAATGCAGCTATACATCTATTTGTATAATCTTAGGCTATCCACTAAAGTATGTGAGTGAACAGTGTATTTTAAGGAGGAT
TCATGAAGTCGAATCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MGNIGNGEKAAGATVAVATVEPSTNSVTSAKRPTKRTNNAVLRQIKPVSQQEALEMLRSALVYLQLSGVQARYRTTEVGL
LLQLDAVYLDGVRFAVRDCI

Sequences:

>Translated_100_residues
MGNIGNGEKAAGATVAVATVEPSTNSVTSAKRPTKRTNNAVLRQIKPVSQQEALEMLRSALVYLQLSGVQARYRTTEVGL
LLQLDAVYLDGVRFAVRDCI
>Mature_99_residues
GNIGNGEKAAGATVAVATVEPSTNSVTSAKRPTKRTNNAVLRQIKPVSQQEALEMLRSALVYLQLSGVQARYRTTEVGLL
LQLDAVYLDGVRFAVRDCI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10762; Mature: 10630

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIGNGEKAAGATVAVATVEPSTNSVTSAKRPTKRTNNAVLRQIKPVSQQEALEMLRSA
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
LVYLQLSGVQARYRTTEVGLLLQLDAVYLDGVRFAVRDCI
HHHHHCCCCCCEEECCCCEEEEEECHHHHCCHHHHHHHCC
>Mature Secondary Structure 
GNIGNGEKAAGATVAVATVEPSTNSVTSAKRPTKRTNNAVLRQIKPVSQQEALEMLRSA
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
LVYLQLSGVQARYRTTEVGLLLQLDAVYLDGVRFAVRDCI
HHHHHCCCCCCEEECCCCEEEEEECHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA