| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897881
Identifier: 159897881
GI number: 159897881
Start: 1569580
End: 1570437
Strand: Direct
Name: 159897881
Synonym: Haur_1355
Alternate gene names: NA
Gene position: 1569580-1570437 (Clockwise)
Preceding gene: 159897880
Following gene: 159897882
Centisome position: 24.73
GC content: 48.6
Gene sequence:
>858_bases ATGCTTGCTTCCCATAATCGTCAATCGATTAAGTCGTTGATCATTTTCGGTAGCGGCTTGGCCTATGTACTTTCGATCGT GATGATGGAGGTCTTGGTTGGCTTTGCCCTCGGTGATATCAGCGATTCACTGATCATGCAAGCCTTAGTTGGTATTGGAA TTCTAGGAACCTTTCTGAGTGCTTGCTTGATTCCGTTGGCATTGCACTATTGGCTGGCACCGGGAACACAATTCATTGTA GGGATTCTCTTTTGGTTGATAGATGTGGTCGTTTTGGCGATTAATGCCACCACCAGCTACCAACTAATTAAGCAGCTTGA ATTATCGAGCTTTTTTACGATGTGGCAATTAGCGATTCCCTTTATTGGTCCGGCGATTACGATTATCGGCTGGGGCTTGG TCTATCTTGCCGATGATGGACAAAAGGATCGTCAGTCAGATCGCTTGCTGGAAACATCAAAACGGGCTTTGATGCGTGAG GCGGAGTATGCGCGGGTGAGTGCTGAGCATGAGTTTGCCATGAAGCAAATTGCCCAGGTGAAGCAATCGCTAATGATGGC ATTACAGGCAAGCGATATTGCCAAGGTTGCCGAGCAGGGCGCGTATAACAGTGCCTTGACTATTACGCGCCAAATTGTTG GATTGCCGATTGATACCACCATTCCACCATCACGATCAGCCGAGTTGCCACCAGTGCCACCAGCATTGCAGCCTGTTGTA CCACCCATGCCACCACCGCGATCAACCGAATTGCCACCATTACCAGTATCATCGGTTCCCAATCAGCAGCCCATGCAGAA CGAGGATGATCATTGGACATTGCTTTTTGAGCAGCAAGCTAACCACCCAAACCCATAG
Upstream 100 bases:
>100_bases ACCCCACGGCCCAACCAGCCAGTTTGATTGAGCTGCCGATCGTGCGCGTCTGGCAACACGCCACCCGTTTAACCGTTGTG AAACAAAAGGGGGCCGCCTG
Downstream 100 bases:
>100_bases TGCCAGTGATTGCCGTTGGTGGAAGTACAACACTTCCACCAATGCCACCAATGCAGGAACTGGCAGATGTCGTGTCACCA TTGGTGGCAATGAGGGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLASHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISDSLIMQALVGIGILGTFLSACLIPLALHYWLAPGTQFIV GILFWLIDVVVLAINATTSYQLIKQLELSSFFTMWQLAIPFIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMRE AEYARVSAEHEFAMKQIAQVKQSLMMALQASDIAKVAEQGAYNSALTITRQIVGLPIDTTIPPSRSAELPPVPPALQPVV PPMPPPRSTELPPLPVSSVPNQQPMQNEDDHWTLLFEQQANHPNP
Sequences:
>Translated_285_residues MLASHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISDSLIMQALVGIGILGTFLSACLIPLALHYWLAPGTQFIV GILFWLIDVVVLAINATTSYQLIKQLELSSFFTMWQLAIPFIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMRE AEYARVSAEHEFAMKQIAQVKQSLMMALQASDIAKVAEQGAYNSALTITRQIVGLPIDTTIPPSRSAELPPVPPALQPVV PPMPPPRSTELPPLPVSSVPNQQPMQNEDDHWTLLFEQQANHPNP >Mature_285_residues MLASHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISDSLIMQALVGIGILGTFLSACLIPLALHYWLAPGTQFIV GILFWLIDVVVLAINATTSYQLIKQLELSSFFTMWQLAIPFIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMRE AEYARVSAEHEFAMKQIAQVKQSLMMALQASDIAKVAEQGAYNSALTITRQIVGLPIDTTIPPSRSAELPPVPPALQPVV PPMPPPRSTELPPLPVSSVPNQQPMQNEDDHWTLLFEQQANHPNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31234; Mature: 31234
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISDSLIMQALVGIGILGTFLS CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLIPLALHYWLAPGTQFIVGILFWLIDVVVLAINATTSYQLIKQLELSSFFTMWQLAIP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMREAEYARVSAEHEFAMKQIAQV HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQSLMMALQASDIAKVAEQGAYNSALTITRQIVGLPIDTTIPPSRSAELPPVPPALQPVV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PPMPPPRSTELPPLPVSSVPNQQPMQNEDDHWTLLFEQQANHPNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MLASHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISDSLIMQALVGIGILGTFLS CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLIPLALHYWLAPGTQFIVGILFWLIDVVVLAINATTSYQLIKQLELSSFFTMWQLAIP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMREAEYARVSAEHEFAMKQIAQV HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQSLMMALQASDIAKVAEQGAYNSALTITRQIVGLPIDTTIPPSRSAELPPVPPALQPVV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PPMPPPRSTELPPLPVSSVPNQQPMQNEDDHWTLLFEQQANHPNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA