| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897877
Identifier: 159897877
GI number: 159897877
Start: 1566147
End: 1567085
Strand: Reverse
Name: 159897877
Synonym: Haur_1351
Alternate gene names: NA
Gene position: 1567085-1566147 (Counterclockwise)
Preceding gene: 159897878
Following gene: 159897876
Centisome position: 24.69
GC content: 55.8
Gene sequence:
>939_bases ATGGCTTCATCGCTCGCTATTGGCCTCAATCCCATCGAGTTGCACATCCTGTTGCTCGTTGCTCGGCTTGGGCGTTTGCT GTCTCGCCACCTGCGTACCGCGTGGGGTCATCCGTTTACCGTGACGATTCAGACGGTTAATCGCACGTTGTCCAAGCTCG TCGATGCCAAGCTGCTCACCTATTGCGAACACTTTCAATCGCATGGCTATGACCCGCGTGGTGCGCTGGGCTGGACACGC CATGGCCGTTTGTATAGTCTCACGCCGCTCGGCTGGGAGATCGTCAAACAGGCATTTCCGATGCTCGAAGAAGGCAGTGA GCGGCTGGCTCCCACCATGGTCAATCTCCAGCATCAAGCTGAACACCAGATTGAATATGCCGAGGTCATCACTAGCTTGA TTCAGTCCTTGCCGTATGTGCCTGGCATTGTGGGAATGAGTAGTTATATTGAGATGGACTTAGGCCCAACCGCACGGCCA CGCGCCGATGGCATCGTCGTGGTGCGCCGCTGGGCCGATGCAACGCAGCCCGACTGTGAGCGCTCGTCACTCTATCCGTG GCTGGGGATTGGTCAACAATCAAAGCAAATTGATCAACTCTATGCGATTGAAATTGATCGCGGAACTGAGGAATTGAGTA TTATCACGGGGAAGGCGCATTCGTATGGGGAGTTGTATCGCTCGAAGTATTGGGAAGGGCGCTACAACTGGCCGCTGATT GCCTTTACCGTGCCGAGCGAACGCCGCAAACGGGCGGTGCTCGATGCGTGGGAAATCGGCTGGCCTGGCAGTCAATTGCT GATTACGACGATCGACGAGGTGCGTGAGTCGGGTATTCTCACGCCGATCTGGACAGCCCAGTACACCAAGCAAGGCCAAC GCATGCAGCAGCCGCATCGCTTTTTACGGGCAGCGTGGTTTGAGAAGATCATCGCATAA
Upstream 100 bases:
>100_bases AAAGAATAGCCCATCAGAATGGCCTAAACTGGCCGTTTGGTCGTGCCGACATTCTTTAACAGGCTGGATAGCCACCATTT TCATCCTGAGGAGGTTGTTC
Downstream 100 bases:
>100_bases GGAATGGAGCAACTGCAGCTACCAGACATGCTATCCACCAATACATCATGCTGCTATACTTTTGATTGCCAATAGTCTGA ATAGGAGCGAGGAGCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLSKLVDAKLLTYCEHFQSHGYDPRGALGWTR HGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMVNLQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARP RADGIVVVRRWADATQPDCERSSLYPWLGIGQQSKQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYNWPLI AFTVPSERRKRAVLDAWEIGWPGSQLLITTIDEVRESGILTPIWTAQYTKQGQRMQQPHRFLRAAWFEKIIA
Sequences:
>Translated_312_residues MASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLSKLVDAKLLTYCEHFQSHGYDPRGALGWTR HGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMVNLQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARP RADGIVVVRRWADATQPDCERSSLYPWLGIGQQSKQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYNWPLI AFTVPSERRKRAVLDAWEIGWPGSQLLITTIDEVRESGILTPIWTAQYTKQGQRMQQPHRFLRAAWFEKIIA >Mature_311_residues ASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLSKLVDAKLLTYCEHFQSHGYDPRGALGWTRH GRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMVNLQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPR ADGIVVVRRWADATQPDCERSSLYPWLGIGQQSKQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYNWPLIA FTVPSERRKRAVLDAWEIGWPGSQLLITTIDEVRESGILTPIWTAQYTKQGQRMQQPHRFLRAAWFEKIIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35601; Mature: 35470
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLSKLVDAKLLT CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH YCEHFQSHGYDPRGALGWTRHGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMVNLQHQA HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPRADGIVVVRRWADATQPDCE HHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCCCC RSSLYPWLGIGQQSKQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYNWPLI HHCCCCCCCCCCCHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEE AFTVPSERRKRAVLDAWEIGWPGSQLLITTIDEVRESGILTPIWTAQYTKQGQRMQQPHR EEECCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH FLRAAWFEKIIA HHHHHHHHHHCC >Mature Secondary Structure ASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLSKLVDAKLLT CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH YCEHFQSHGYDPRGALGWTRHGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMVNLQHQA HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH EHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPRADGIVVVRRWADATQPDCE HHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCCCC RSSLYPWLGIGQQSKQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYNWPLI HHCCCCCCCCCCCHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEE AFTVPSERRKRAVLDAWEIGWPGSQLLITTIDEVRESGILTPIWTAQYTKQGQRMQQPHR EEECCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH FLRAAWFEKIIA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA