| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897831
Identifier: 159897831
GI number: 159897831
Start: 1510755
End: 1512935
Strand: Direct
Name: 159897831
Synonym: Haur_1302
Alternate gene names: NA
Gene position: 1510755-1512935 (Clockwise)
Preceding gene: 159897830
Following gene: 159897832
Centisome position: 23.8
GC content: 52.45
Gene sequence:
>2181_bases ATGGCACGCACTACTCGCGCGATTCCACAACGTACACTTTCTGCTGAAGATCGGGCTACATTTGAGCGGATGGCTGAGAG TATCCGTTCGTTGGTTGGAGTGCACATTAATCAACAGCCTGGGCGTTTTATGTTGGATACGCGGATTATGCTCGATTTGG TGCGTTTTCCGGTGATGCGTCCGACTGGTGGACGGGTGACGTGGGGCGGCTATTTTACCTATTCGCCAACCTATGCCTCA TTAACCCCCGAACAACGTTGGAATTATATTGCTTGGTTGGCTGGCGATGAGAGCGGAGCGATTCAGCTCTTTCGAATTAT GCGGCTCTATGCCTTGTGTGCTGAATTAACCACCACCCGCCGCGATGAAGCAATTACGGCTATGCGTCAGTTGTACGATT CGAGCACCAATGATGCGGTAGCCCAAAGCTCGATTGGCAATGTGCTAACCTTGGCCTATGCCGCTTCGCAACCTGAATTA TTGGGCGAATGGCTCACGCTCTACACTCCCTCAAATGCAATTCCTGCTGATGTGTTGATTCGTTGTTTTGCCTTAGCTTC GATTGAGGCTAGTGGTCCGTTGTTATTTGATATTGCCTCGCGCTGTAATTTCAAGCTTGGCCGTGGTTTAGGTGGCAAAC GTGCCGCGATTGAGCAGGCCATGCGCGATATTGCTGAACGCTGGGGCGAACGCCATCAAACTACCGTCATTCGGACTATG GTCGAGCAAACCCCAACCATGCCCGTAGCCTTAAACTACAGCGATACCTTGGTGATGTGGGTTGCCCGCGCGTTGGAGCT TTCCCAAGGCGTGTTTTTATTCGATCGCTCTGATGCAGCGAGTTTTATTCGTGGTTTAGCCGCTGCTGCGCAGGAGCAAG TGCGCTCGAACAAAAAAGGCAGCACCCCGCTCGATGGCCTTGAATTGCTCGATGGTATTCTCAAGGGCGATGGCGGTGTG GTGCAATTCGACCTTTCTGGCTCGGCTGAATATGTGATGACCGAGGAAGAAGAGGCCATCCTCGAGCAAAAATTGGCGCG AATTCAAAAAGTGCCTGGGGTCAAAATCGTCAAAAACGAGTGGGATGTCTTTTCCTACTGGAGTGGCCGCCAAAACACCT CGCCCGATGCTGTGCTGATTCGCACGCTGTCGATTAAGCAACCAAGCTCGCCAGAACCCTGGAATGCTCCAACGCCACCA ACCTACGCCGTTGCTTCCTACAAAACGCTTACACCTGAACAACGCTGGTGGTATTTGGATTGGCTGGCAGGTGAAGATAT TAAGCCCTTGGATGTTTTTTGGGCGGTGCGTTTCAAAGGCCTAGAGGCAGCATTTGCCCGCTTATCACCCCAAAAAGCCC AAGAACAAACCGATTCTTGGTTTGACGAACGCGATCCACGTTTGCTTAAACATAACATCGTGGGCATGCTCGAAACGATT TTCGACCAAACAACCGATGAATCGTTGATGCGGGCTGGGCTAGATTTGCTCATGCCACTGTATAGCGATTTTGGCGATGT CGAACGGGCAACCGCTGCCTTCAATCGCACCCCAATGAACCCCGACCAAGCGACGCGCCTGTTGGAATTGCTTTGGAATA CGGGTGGGGTAGTCGATGGTCGTGGTTTGTTGTATGTAGCGCGAGTTGGCGGTTTCAACCATACCCCATTAACTCGCGAA TGCTTCGACCAAATTGCTGAACGCGCCGAGCAATTGATCAACGAATGGGAAATGGATAACGGCCCATTGAGCGATTTGCC AATTGTTAATTTTAGCTATACCCGCTCTAAGCGGCGAGTGGTTAGCGCAGTCAGTGTTGCCGCCGATGTGGCACGCCAAG CTCAAGAAGAAATTAAAGCCCAGCGTCGTTCGGCTCCACGGACTGCCCGTATGAGCGCCGAAGAAATCGAGGCCGAACAA GCTGAATTAGCTGAATTGCCAACCAATGCTGGCGATGGCCCAGCTGAGGCGATTTATGTCCAACTGGCCAGCGATCCGCA GTTGGTTGAACTTTATTTGAGCTATGGAGCCAACGCCTTGGATCAAGGGCGACCAACTGAGGCAGTGGCCTTTTTGCGCC GTGCTGCCGAACTCGACCCACGCAGCCATGCCAGCTTGTTGTTGCCCTTGGCGCGTTTACGCCTAAGCGAAGCTGCTCAC GACCCGAAGCCGAATCAGTAG
Upstream 100 bases:
>100_bases TGAGTATTCTCAACCAATCACAAAGTGTTAAGTCTGACGAGTGGGCAGAAATATGCTACAATAAGCGCTGATGTTTAACT TTGAGGTGACATAATCCACG
Downstream 100 bases:
>100_bases AAAATAGGTTTTTACCAATGGATGAATTACGTCGCCAGCGTTATCTTGAGATTCTGGCCAGCCTGCCTGAGCCAACCTTT GAGCTTGAGCAGCTTGTCCA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMRPTGGRVTWGGYFTYSPTYAS LTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTRRDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPEL LGEWLTLYTPSNAIPADVLIRCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKGSTPLDGLELLDGILKGDGGV VQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNEWDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPP TYAVASYKTLTPEQRWWYLDWLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDGRGLLYVARVGGFNHTPLTRE CFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRVVSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQ AELAELPTNAGDGPAEAIYVQLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH DPKPNQ
Sequences:
>Translated_726_residues MARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMRPTGGRVTWGGYFTYSPTYAS LTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTRRDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPEL LGEWLTLYTPSNAIPADVLIRCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKGSTPLDGLELLDGILKGDGGV VQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNEWDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPP TYAVASYKTLTPEQRWWYLDWLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDGRGLLYVARVGGFNHTPLTRE CFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRVVSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQ AELAELPTNAGDGPAEAIYVQLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH DPKPNQ >Mature_725_residues ARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMRPTGGRVTWGGYFTYSPTYASL TPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTRRDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPELL GEWLTLYTPSNAIPADVLIRCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTMV EQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKGSTPLDGLELLDGILKGDGGVV QFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNEWDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPPT YAVASYKTLTPEQRWWYLDWLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETIF DQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDGRGLLYVARVGGFNHTPLTREC FDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRVVSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQA ELAELPTNAGDGPAEAIYVQLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAHD PKPNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80931; Mature: 80799
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS50172 BRCT ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMR CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCC PTGGRVTWGGYFTYSPTYASLTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTR CCCCEEEECEEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC RDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPELLGEWLTLYTPSNAIPADVLI HHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHEECCCCCCCHHHHH RCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM HHHHHHHCCCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKG HHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCC STPLDGLELLDGILKGDGGVVQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNE CCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEECCC WDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPPTYAVASYKTLTPEQRWWYLD CCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE WLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI EECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDG HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECC RGLLYVARVGGFNHTPLTRECFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRV CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH VSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQAELAELPTNAGDGPAEAIYV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE QLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH EECCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC DPKPNQ CCCCCC >Mature Secondary Structure ARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMR CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCC PTGGRVTWGGYFTYSPTYASLTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTR CCCCEEEECEEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC RDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPELLGEWLTLYTPSNAIPADVLI HHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHEECCCCCCCHHHHH RCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM HHHHHHHCCCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKG HHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCC STPLDGLELLDGILKGDGGVVQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNE CCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEECCC WDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPPTYAVASYKTLTPEQRWWYLD CCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE WLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI EECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDG HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECC RGLLYVARVGGFNHTPLTRECFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRV CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH VSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQAELAELPTNAGDGPAEAIYV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE QLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH EECCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC DPKPNQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA