Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897831

Identifier: 159897831

GI number: 159897831

Start: 1510755

End: 1512935

Strand: Direct

Name: 159897831

Synonym: Haur_1302

Alternate gene names: NA

Gene position: 1510755-1512935 (Clockwise)

Preceding gene: 159897830

Following gene: 159897832

Centisome position: 23.8

GC content: 52.45

Gene sequence:

>2181_bases
ATGGCACGCACTACTCGCGCGATTCCACAACGTACACTTTCTGCTGAAGATCGGGCTACATTTGAGCGGATGGCTGAGAG
TATCCGTTCGTTGGTTGGAGTGCACATTAATCAACAGCCTGGGCGTTTTATGTTGGATACGCGGATTATGCTCGATTTGG
TGCGTTTTCCGGTGATGCGTCCGACTGGTGGACGGGTGACGTGGGGCGGCTATTTTACCTATTCGCCAACCTATGCCTCA
TTAACCCCCGAACAACGTTGGAATTATATTGCTTGGTTGGCTGGCGATGAGAGCGGAGCGATTCAGCTCTTTCGAATTAT
GCGGCTCTATGCCTTGTGTGCTGAATTAACCACCACCCGCCGCGATGAAGCAATTACGGCTATGCGTCAGTTGTACGATT
CGAGCACCAATGATGCGGTAGCCCAAAGCTCGATTGGCAATGTGCTAACCTTGGCCTATGCCGCTTCGCAACCTGAATTA
TTGGGCGAATGGCTCACGCTCTACACTCCCTCAAATGCAATTCCTGCTGATGTGTTGATTCGTTGTTTTGCCTTAGCTTC
GATTGAGGCTAGTGGTCCGTTGTTATTTGATATTGCCTCGCGCTGTAATTTCAAGCTTGGCCGTGGTTTAGGTGGCAAAC
GTGCCGCGATTGAGCAGGCCATGCGCGATATTGCTGAACGCTGGGGCGAACGCCATCAAACTACCGTCATTCGGACTATG
GTCGAGCAAACCCCAACCATGCCCGTAGCCTTAAACTACAGCGATACCTTGGTGATGTGGGTTGCCCGCGCGTTGGAGCT
TTCCCAAGGCGTGTTTTTATTCGATCGCTCTGATGCAGCGAGTTTTATTCGTGGTTTAGCCGCTGCTGCGCAGGAGCAAG
TGCGCTCGAACAAAAAAGGCAGCACCCCGCTCGATGGCCTTGAATTGCTCGATGGTATTCTCAAGGGCGATGGCGGTGTG
GTGCAATTCGACCTTTCTGGCTCGGCTGAATATGTGATGACCGAGGAAGAAGAGGCCATCCTCGAGCAAAAATTGGCGCG
AATTCAAAAAGTGCCTGGGGTCAAAATCGTCAAAAACGAGTGGGATGTCTTTTCCTACTGGAGTGGCCGCCAAAACACCT
CGCCCGATGCTGTGCTGATTCGCACGCTGTCGATTAAGCAACCAAGCTCGCCAGAACCCTGGAATGCTCCAACGCCACCA
ACCTACGCCGTTGCTTCCTACAAAACGCTTACACCTGAACAACGCTGGTGGTATTTGGATTGGCTGGCAGGTGAAGATAT
TAAGCCCTTGGATGTTTTTTGGGCGGTGCGTTTCAAAGGCCTAGAGGCAGCATTTGCCCGCTTATCACCCCAAAAAGCCC
AAGAACAAACCGATTCTTGGTTTGACGAACGCGATCCACGTTTGCTTAAACATAACATCGTGGGCATGCTCGAAACGATT
TTCGACCAAACAACCGATGAATCGTTGATGCGGGCTGGGCTAGATTTGCTCATGCCACTGTATAGCGATTTTGGCGATGT
CGAACGGGCAACCGCTGCCTTCAATCGCACCCCAATGAACCCCGACCAAGCGACGCGCCTGTTGGAATTGCTTTGGAATA
CGGGTGGGGTAGTCGATGGTCGTGGTTTGTTGTATGTAGCGCGAGTTGGCGGTTTCAACCATACCCCATTAACTCGCGAA
TGCTTCGACCAAATTGCTGAACGCGCCGAGCAATTGATCAACGAATGGGAAATGGATAACGGCCCATTGAGCGATTTGCC
AATTGTTAATTTTAGCTATACCCGCTCTAAGCGGCGAGTGGTTAGCGCAGTCAGTGTTGCCGCCGATGTGGCACGCCAAG
CTCAAGAAGAAATTAAAGCCCAGCGTCGTTCGGCTCCACGGACTGCCCGTATGAGCGCCGAAGAAATCGAGGCCGAACAA
GCTGAATTAGCTGAATTGCCAACCAATGCTGGCGATGGCCCAGCTGAGGCGATTTATGTCCAACTGGCCAGCGATCCGCA
GTTGGTTGAACTTTATTTGAGCTATGGAGCCAACGCCTTGGATCAAGGGCGACCAACTGAGGCAGTGGCCTTTTTGCGCC
GTGCTGCCGAACTCGACCCACGCAGCCATGCCAGCTTGTTGTTGCCCTTGGCGCGTTTACGCCTAAGCGAAGCTGCTCAC
GACCCGAAGCCGAATCAGTAG

Upstream 100 bases:

>100_bases
TGAGTATTCTCAACCAATCACAAAGTGTTAAGTCTGACGAGTGGGCAGAAATATGCTACAATAAGCGCTGATGTTTAACT
TTGAGGTGACATAATCCACG

Downstream 100 bases:

>100_bases
AAAATAGGTTTTTACCAATGGATGAATTACGTCGCCAGCGTTATCTTGAGATTCTGGCCAGCCTGCCTGAGCCAACCTTT
GAGCTTGAGCAGCTTGTCCA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 726; Mature: 725

Protein sequence:

>726_residues
MARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMRPTGGRVTWGGYFTYSPTYAS
LTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTRRDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPEL
LGEWLTLYTPSNAIPADVLIRCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM
VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKGSTPLDGLELLDGILKGDGGV
VQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNEWDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPP
TYAVASYKTLTPEQRWWYLDWLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI
FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDGRGLLYVARVGGFNHTPLTRE
CFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRVVSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQ
AELAELPTNAGDGPAEAIYVQLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH
DPKPNQ

Sequences:

>Translated_726_residues
MARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMRPTGGRVTWGGYFTYSPTYAS
LTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTRRDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPEL
LGEWLTLYTPSNAIPADVLIRCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM
VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKGSTPLDGLELLDGILKGDGGV
VQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNEWDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPP
TYAVASYKTLTPEQRWWYLDWLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI
FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDGRGLLYVARVGGFNHTPLTRE
CFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRVVSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQ
AELAELPTNAGDGPAEAIYVQLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH
DPKPNQ
>Mature_725_residues
ARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMRPTGGRVTWGGYFTYSPTYASL
TPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTRRDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPELL
GEWLTLYTPSNAIPADVLIRCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTMV
EQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKGSTPLDGLELLDGILKGDGGVV
QFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNEWDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPPT
YAVASYKTLTPEQRWWYLDWLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETIF
DQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDGRGLLYVARVGGFNHTPLTREC
FDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRVVSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQA
ELAELPTNAGDGPAEAIYVQLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAHD
PKPNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80931; Mature: 80799

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50172 BRCT ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMR
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCC
PTGGRVTWGGYFTYSPTYASLTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTR
CCCCEEEECEEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
RDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPELLGEWLTLYTPSNAIPADVLI
HHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHEECCCCCCCHHHHH
RCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM
HHHHHHHCCCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKG
HHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
STPLDGLELLDGILKGDGGVVQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNE
CCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEECCC
WDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPPTYAVASYKTLTPEQRWWYLD
CCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
WLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI
EECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDG
HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECC
RGLLYVARVGGFNHTPLTRECFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
VSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQAELAELPTNAGDGPAEAIYV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
QLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH
EECCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DPKPNQ
CCCCCC
>Mature Secondary Structure 
ARTTRAIPQRTLSAEDRATFERMAESIRSLVGVHINQQPGRFMLDTRIMLDLVRFPVMR
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCC
PTGGRVTWGGYFTYSPTYASLTPEQRWNYIAWLAGDESGAIQLFRIMRLYALCAELTTTR
CCCCEEEECEEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
RDEAITAMRQLYDSSTNDAVAQSSIGNVLTLAYAASQPELLGEWLTLYTPSNAIPADVLI
HHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHEECCCCCCCHHHHH
RCFALASIEASGPLLFDIASRCNFKLGRGLGGKRAAIEQAMRDIAERWGERHQTTVIRTM
HHHHHHHCCCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VEQTPTMPVALNYSDTLVMWVARALELSQGVFLFDRSDAASFIRGLAAAAQEQVRSNKKG
HHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
STPLDGLELLDGILKGDGGVVQFDLSGSAEYVMTEEEEAILEQKLARIQKVPGVKIVKNE
CCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEECCC
WDVFSYWSGRQNTSPDAVLIRTLSIKQPSSPEPWNAPTPPTYAVASYKTLTPEQRWWYLD
CCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
WLAGEDIKPLDVFWAVRFKGLEAAFARLSPQKAQEQTDSWFDERDPRLLKHNIVGMLETI
EECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDQTTDESLMRAGLDLLMPLYSDFGDVERATAAFNRTPMNPDQATRLLELLWNTGGVVDG
HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECC
RGLLYVARVGGFNHTPLTRECFDQIAERAEQLINEWEMDNGPLSDLPIVNFSYTRSKRRV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
VSAVSVAADVARQAQEEIKAQRRSAPRTARMSAEEIEAEQAELAELPTNAGDGPAEAIYV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
QLASDPQLVELYLSYGANALDQGRPTEAVAFLRRAAELDPRSHASLLLPLARLRLSEAAH
EECCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DPKPNQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA