| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897830
Identifier: 159897830
GI number: 159897830
Start: 1509716
End: 1510369
Strand: Direct
Name: 159897830
Synonym: Haur_1301
Alternate gene names: NA
Gene position: 1509716-1510369 (Clockwise)
Preceding gene: 159897829
Following gene: 159897831
Centisome position: 23.79
GC content: 45.11
Gene sequence:
>654_bases ATGCGTTTTTGCTGCTTATTGGGCTGGATTATCGTGTTATTGATGGGTTGTCAGGCCAAGCAAGATCCGCTGGCCGACCC AGAACAGGAAACTTCAATGTTAGCGATTGATCAAGCAACCGTGGTGACTTTACGCGAAGGCACCGATTTGCATATCGAAG GCTTGAATCTTGGTGTTTTGCAAATTTTATATGCTGCTGATCAGCCGCAGCAATCAATTGGTGTGCGCATTCGCTTTTTA ACCAAGCCAGCGATTTTTAATTATCACACCCAATTAATGCTTGATCAGACGATTACGGTCGCAAATTATCAAGTGCAATT GCTGTCAATCGAGCAAAGCTCAATTCAAGTGGCCATTCGTTTAACTGCTGAACAAGCGCCTATTTTGCCAATTGAAGCCC TTGGCCAAGAACAATTATTGATTGCGCCCGCCAATAGTAGTGTTGGCGATGGCTATCTAACAATTACAATTGGTGATTAT GACCCTGCGAATGGCCAAGTTGAATTGAGTTTCTGGGTTAGTAGCAGCGTGCCCGAATTAAAACAAACTGCAACACTTGG CCAAGTTATTGAATATCAAGGTTATCGGGTGCGAGTCTTGTGGCTGCCCAACGCCGCTTATCCCATGGTTGCGCTTGGCT TGCAAGCCGAATAA
Upstream 100 bases:
>100_bases GGTCGTGGGATGAATCACCAGTCACGGTCGATTATGCGGATCTTGAGCAGGTGTTTAATGTTGTTATAACCAATCCAATT GATTAATTGGCGGGGGTTGC
Downstream 100 bases:
>100_bases GTTTCGTCAATAACGAGGTTTTGTGCCATCAAAAATTGCTATTTAGGGGGATTACGGGGATTAAGGATAATTTCCGTTCC CTCACCCCAACCCCTCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRFCCLLGWIIVLLMGCQAKQDPLADPEQETSMLAIDQATVVTLREGTDLHIEGLNLGVLQILYAADQPQQSIGVRIRFL TKPAIFNYHTQLMLDQTITVANYQVQLLSIEQSSIQVAIRLTAEQAPILPIEALGQEQLLIAPANSSVGDGYLTITIGDY DPANGQVELSFWVSSSVPELKQTATLGQVIEYQGYRVRVLWLPNAAYPMVALGLQAE
Sequences:
>Translated_217_residues MRFCCLLGWIIVLLMGCQAKQDPLADPEQETSMLAIDQATVVTLREGTDLHIEGLNLGVLQILYAADQPQQSIGVRIRFL TKPAIFNYHTQLMLDQTITVANYQVQLLSIEQSSIQVAIRLTAEQAPILPIEALGQEQLLIAPANSSVGDGYLTITIGDY DPANGQVELSFWVSSSVPELKQTATLGQVIEYQGYRVRVLWLPNAAYPMVALGLQAE >Mature_217_residues MRFCCLLGWIIVLLMGCQAKQDPLADPEQETSMLAIDQATVVTLREGTDLHIEGLNLGVLQILYAADQPQQSIGVRIRFL TKPAIFNYHTQLMLDQTITVANYQVQLLSIEQSSIQVAIRLTAEQAPILPIEALGQEQLLIAPANSSVGDGYLTITIGDY DPANGQVELSFWVSSSVPELKQTATLGQVIEYQGYRVRVLWLPNAAYPMVALGLQAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23856; Mature: 23856
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFCCLLGWIIVLLMGCQAKQDPLADPEQETSMLAIDQATVVTLREGTDLHIEGLNLGVL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCEEEEECCCHHHE QILYAADQPQQSIGVRIRFLTKPAIFNYHTQLMLDQTITVANYQVQLLSIEQSSIQVAIR EEEECCCCCCHHHCEEEEEEECCCEECEEEEEEEECEEEEEEEEEEEEEEECCCEEEEEE LTAEQAPILPIEALGQEQLLIAPANSSVGDGYLTITIGDYDPANGQVELSFWVSSSVPEL EECCCCCCCCHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHH KQTATLGQVIEYQGYRVRVLWLPNAAYPMVALGLQAE HHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MRFCCLLGWIIVLLMGCQAKQDPLADPEQETSMLAIDQATVVTLREGTDLHIEGLNLGVL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCEEEEECCCHHHE QILYAADQPQQSIGVRIRFLTKPAIFNYHTQLMLDQTITVANYQVQLLSIEQSSIQVAIR EEEECCCCCCHHHCEEEEEEECCCEECEEEEEEEECEEEEEEEEEEEEEEECCCEEEEEE LTAEQAPILPIEALGQEQLLIAPANSSVGDGYLTITIGDYDPANGQVELSFWVSSSVPEL EECCCCCCCCHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHH KQTATLGQVIEYQGYRVRVLWLPNAAYPMVALGLQAE HHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA