Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897801

Identifier: 159897801

GI number: 159897801

Start: 1483299

End: 1483718

Strand: Direct

Name: 159897801

Synonym: Haur_1272

Alternate gene names: NA

Gene position: 1483299-1483718 (Clockwise)

Preceding gene: 159897799

Following gene: 159897802

Centisome position: 23.37

GC content: 51.19

Gene sequence:

>420_bases
ATGCAGGTTGAATATGTACCAAGTTTGTTGCGCCAACGGGTATTGTATGATCCTCCGCGTGGGCCTGCCCGCTTCGAGGC
CTACACCACGAGCATGCTCAATGCCCAACGTGATGGCATCGACTGGCCTTTTGTAGCACTTAACCCAATGGGCAAGCAGC
ATGTACCAGCCCATTATGAGGCACTGTTGGCGTTTGATGCTGAAGCTATTGCCCAACAAACCCTTGCCGAGATTCAGGCC
GATTTTCCGCCGATGGATTTCGCGTTACGCATGACCTTGGTGGTCGTTGACGATCTTATGGGCGGTTGGACGCAGCAGCA
TTTTACCGATTGGGCTTATCGCTTTAATCTTATGCCCAATCCAAAAAATACATGGTTGCCCATCTATAGCTGGACAAGAG
CATCCCTACTCCAGCCTTGA

Upstream 100 bases:

>100_bases
ACAGCATAAAAATCATTAAGTAATTATTAAGTAATTTCAACCCAACTTGAACAACTTCTTGAACATGCGGCTTGAAGCAT
AACCAAATTAAGGAGATTGA

Downstream 100 bases:

>100_bases
TTGCACAATCAGTCCGTGCTGTGCTTTATCGTGCTGCCTATTGTTTGATCCACGGGGCCCGAAACTTGTCCGAAATGTTG
CGGCAAGAAGGGGCAGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQVEYVPSLLRQRVLYDPPRGPARFEAYTTSMLNAQRDGIDWPFVALNPMGKQHVPAHYEALLAFDAEAIAQQTLAEIQA
DFPPMDFALRMTLVVVDDLMGGWTQQHFTDWAYRFNLMPNPKNTWLPIYSWTRASLLQP

Sequences:

>Translated_139_residues
MQVEYVPSLLRQRVLYDPPRGPARFEAYTTSMLNAQRDGIDWPFVALNPMGKQHVPAHYEALLAFDAEAIAQQTLAEIQA
DFPPMDFALRMTLVVVDDLMGGWTQQHFTDWAYRFNLMPNPKNTWLPIYSWTRASLLQP
>Mature_139_residues
MQVEYVPSLLRQRVLYDPPRGPARFEAYTTSMLNAQRDGIDWPFVALNPMGKQHVPAHYEALLAFDAEAIAQQTLAEIQA
DFPPMDFALRMTLVVVDDLMGGWTQQHFTDWAYRFNLMPNPKNTWLPIYSWTRASLLQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16042; Mature: 16042

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVEYVPSLLRQRVLYDPPRGPARFEAYTTSMLNAQRDGIDWPFVALNPMGKQHVPAHYE
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
ALLAFDAEAIAQQTLAEIQADFPPMDFALRMTLVVVDDLMGGWTQQHFTDWAYRFNLMPN
HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCC
PKNTWLPIYSWTRASLLQP
CCCCEEEEECCCHHHCCCC
>Mature Secondary Structure
MQVEYVPSLLRQRVLYDPPRGPARFEAYTTSMLNAQRDGIDWPFVALNPMGKQHVPAHYE
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
ALLAFDAEAIAQQTLAEIQADFPPMDFALRMTLVVVDDLMGGWTQQHFTDWAYRFNLMPN
HHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCC
PKNTWLPIYSWTRASLLQP
CCCCEEEEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA