| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yqhQ [H]
Identifier: 159897373
GI number: 159897373
Start: 953611
End: 954534
Strand: Direct
Name: yqhQ [H]
Synonym: Haur_0844
Alternate gene names: 159897373
Gene position: 953611-954534 (Clockwise)
Preceding gene: 159897372
Following gene: 159897374
Centisome position: 15.03
GC content: 54.98
Gene sequence:
>924_bases ATGGCTGAACGGTTTCCGTATGGTGGACAAGCAGTAATGGAAGGCGTGATGATGCGCGGTTTGCACCGGGCTAGTGTCGC TGTCCGTTCACCTGCCGGCCAGATCGTCATTCGCGACCGTGAACTGAATTTGGAGCGGCGGGTCTTTTGGAGTCGGTTAC CACTGCTGCGGGGCATTCAGCTTTTGGGCGATGCCTTAGTGATTGGGATGTGGGCCTTGATGTTCTCGGCCAGTGTGACC GACGATCAAGCCGAGCAACCCTTGAGCAAAGGGCAAACAGCGCTGCTGGTAACCACCTCGGTCGGCATATCGATCGCCTT ATTTTTCGTTTTGCCCTTGCTGGTGGCTTCGGGAATTGCCAATTGGGCTAATCTCGGCATCTACAGTCGCGAAACGATTG AAGGCATCACGCGCTTGCTCATTTTTGTTGGCTACTTGGTACTTGTCGGGCGAACCGCCGAAATCCGCCGAGTTTTCGGG TATCATGGCGCTGAGCACAAAGCTGTTTCGGCCTACGAAGCTGGTTGTCCATTGACCGTTGAGCATGTTCGACCGTTCAC AACCATCCACCCGCGCTGTGGCACAACCTTATTACTAATTGTGGTGGTGCTCAGCATTCCTGTATTTGCATTGCTTGGCA CGTTTCCCTTTTGGCTACGTTTGCTAAGTCGAATCATCCTAGTGCCGTTTGTGGCGGCGCTTGCCTACGAGCTTATGCGG CTAACCGCAAGCAAGGCAACCAACCCGATTGTGCGTGGTTTGATGACACCAGCATTGGCGCTGCAACGCTTGACCACCCG CGAACCCGATGATGCCATGCTTGAGGTAGCAATCGCTGCCCTGGCGCGGGTCTTGGCCGCCGATGGTCAAACGGTTGAAA GTCAGCCAATCGCGGTCGATATTCGGCCTGCACTTACGTCCTAA
Upstream 100 bases:
>100_bases CAACGATCGCAACCAAAATAACTAGGCTGCCCTCTTGTCAAACGACAAGGGCTAGTGGTACGATACACAGACCAACCCAT CCTCCTATGTGGTGAACGCT
Downstream 100 bases:
>100_bases CATCGTACATCCAGAGTGAGGGCATCTGTATGGCTCTTGTTGGTAATTTGCGCGACTTTGCACTCGCTGATTTTCTTTAT CTGATCGATCGCGGGTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQLLGDALVIGMWALMFSASVT DDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIANWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFG YHGAEHKAVSAYEAGCPLTVEHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVDIRPALTS
Sequences:
>Translated_307_residues MAERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQLLGDALVIGMWALMFSASVT DDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIANWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFG YHGAEHKAVSAYEAGCPLTVEHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVDIRPALTS >Mature_306_residues AERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQLLGDALVIGMWALMFSASVTD DQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIANWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFGY HGAEHKAVSAYEAGCPLTVEHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMRL TASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVDIRPALTS
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 33450; Mature: 33319
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQ CCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH LLGDALVIGMWALMFSASVTDDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIA HHHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH NWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFGYHGAEHKAVSAYEAGCPLTV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEH EHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR HHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVD HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE IRPALTS CCCCCCC >Mature Secondary Structure AERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQ CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH LLGDALVIGMWALMFSASVTDDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIA HHHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH NWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFGYHGAEHKAVSAYEAGCPLTV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEH EHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR HHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVD HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE IRPALTS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]