Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yqhQ [H]

Identifier: 159897373

GI number: 159897373

Start: 953611

End: 954534

Strand: Direct

Name: yqhQ [H]

Synonym: Haur_0844

Alternate gene names: 159897373

Gene position: 953611-954534 (Clockwise)

Preceding gene: 159897372

Following gene: 159897374

Centisome position: 15.03

GC content: 54.98

Gene sequence:

>924_bases
ATGGCTGAACGGTTTCCGTATGGTGGACAAGCAGTAATGGAAGGCGTGATGATGCGCGGTTTGCACCGGGCTAGTGTCGC
TGTCCGTTCACCTGCCGGCCAGATCGTCATTCGCGACCGTGAACTGAATTTGGAGCGGCGGGTCTTTTGGAGTCGGTTAC
CACTGCTGCGGGGCATTCAGCTTTTGGGCGATGCCTTAGTGATTGGGATGTGGGCCTTGATGTTCTCGGCCAGTGTGACC
GACGATCAAGCCGAGCAACCCTTGAGCAAAGGGCAAACAGCGCTGCTGGTAACCACCTCGGTCGGCATATCGATCGCCTT
ATTTTTCGTTTTGCCCTTGCTGGTGGCTTCGGGAATTGCCAATTGGGCTAATCTCGGCATCTACAGTCGCGAAACGATTG
AAGGCATCACGCGCTTGCTCATTTTTGTTGGCTACTTGGTACTTGTCGGGCGAACCGCCGAAATCCGCCGAGTTTTCGGG
TATCATGGCGCTGAGCACAAAGCTGTTTCGGCCTACGAAGCTGGTTGTCCATTGACCGTTGAGCATGTTCGACCGTTCAC
AACCATCCACCCGCGCTGTGGCACAACCTTATTACTAATTGTGGTGGTGCTCAGCATTCCTGTATTTGCATTGCTTGGCA
CGTTTCCCTTTTGGCTACGTTTGCTAAGTCGAATCATCCTAGTGCCGTTTGTGGCGGCGCTTGCCTACGAGCTTATGCGG
CTAACCGCAAGCAAGGCAACCAACCCGATTGTGCGTGGTTTGATGACACCAGCATTGGCGCTGCAACGCTTGACCACCCG
CGAACCCGATGATGCCATGCTTGAGGTAGCAATCGCTGCCCTGGCGCGGGTCTTGGCCGCCGATGGTCAAACGGTTGAAA
GTCAGCCAATCGCGGTCGATATTCGGCCTGCACTTACGTCCTAA

Upstream 100 bases:

>100_bases
CAACGATCGCAACCAAAATAACTAGGCTGCCCTCTTGTCAAACGACAAGGGCTAGTGGTACGATACACAGACCAACCCAT
CCTCCTATGTGGTGAACGCT

Downstream 100 bases:

>100_bases
CATCGTACATCCAGAGTGAGGGCATCTGTATGGCTCTTGTTGGTAATTTGCGCGACTTTGCACTCGCTGATTTTCTTTAT
CTGATCGATCGCGGGTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQLLGDALVIGMWALMFSASVT
DDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIANWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFG
YHGAEHKAVSAYEAGCPLTVEHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR
LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVDIRPALTS

Sequences:

>Translated_307_residues
MAERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQLLGDALVIGMWALMFSASVT
DDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIANWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFG
YHGAEHKAVSAYEAGCPLTVEHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR
LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVDIRPALTS
>Mature_306_residues
AERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQLLGDALVIGMWALMFSASVTD
DQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIANWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFGY
HGAEHKAVSAYEAGCPLTVEHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMRL
TASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVDIRPALTS

Specific function: Unknown

COG id: COG3872

COG function: function code R; Predicted metal-dependent enzyme

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010787
- ProDom:   PD131510 [H]

Pfam domain/function: PF07136 DUF1385 [H]

EC number: NA

Molecular weight: Translated: 33450; Mature: 33319

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
LLGDALVIGMWALMFSASVTDDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIA
HHHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
NWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFGYHGAEHKAVSAYEAGCPLTV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEH
EHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR
HHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVD
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
IRPALTS
CCCCCCC
>Mature Secondary Structure 
AERFPYGGQAVMEGVMMRGLHRASVAVRSPAGQIVIRDRELNLERRVFWSRLPLLRGIQ
CCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
LLGDALVIGMWALMFSASVTDDQAEQPLSKGQTALLVTTSVGISIALFFVLPLLVASGIA
HHHHHHHHHHHHHHHHCCCCCHHHHCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
NWANLGIYSRETIEGITRLLIFVGYLVLVGRTAEIRRVFGYHGAEHKAVSAYEAGCPLTV
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCEEH
EHVRPFTTIHPRCGTTLLLIVVVLSIPVFALLGTFPFWLRLLSRIILVPFVAALAYELMR
HHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTASKATNPIVRGLMTPALALQRLTTREPDDAMLEVAIAALARVLAADGQTVESQPIAVD
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
IRPALTS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]