| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897372
Identifier: 159897372
GI number: 159897372
Start: 953167
End: 953535
Strand: Direct
Name: 159897372
Synonym: Haur_0843
Alternate gene names: NA
Gene position: 953167-953535 (Clockwise)
Preceding gene: 159897371
Following gene: 159897373
Centisome position: 15.02
GC content: 52.03
Gene sequence:
>369_bases ATGGGCTGGCTGAACGAAGCCCGCGATCTTGCGATTATCCTCTTGGCAATTTTCCAACTCTTCTCTGTCACCTTAATGAT TATTTTGGTGGGCGTGTTGGTGGTGATGGTCAACGAGTTACGCAACTTGGCCAAGGAAAAAATCTCGCCCAAGGTCGAAG ATGTGCTGGAACGGGTCAAAGACATTACCGAAAATGCCAAATCGACGACCACAACTGCCAAGCAAACCGCTTCGTATGTG GCTGAAGGCGTGGTTTCGCCAGTGATCAAGGCTGCCAGCTTGTTAGCAGGGGTCAAAGCGGGAGCCAAGTCGTTGGCGCG ACGGCAAGCGCGTGGCACATTGCCCAACGATCGCAACCAAAATAACTAG
Upstream 100 bases:
>100_bases TCGTGTCGGTACGCTGGAGGATTGCTTGAAGAAGTTTGCCATCATCGGGGGCATCGTCCTCCTTGTCCTTGGGATTGGTC TTCCGATTTTGTTGATATCG
Downstream 100 bases:
>100_bases GCTGCCCTCTTGTCAAACGACAAGGGCTAGTGGTACGATACACAGACCAACCCATCCTCCTATGTGGTGAACGCTATGGC TGAACGGTTTCCGTATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGWLNEARDLAIILLAIFQLFSVTLMIILVGVLVVMVNELRNLAKEKISPKVEDVLERVKDITENAKSTTTTAKQTASYV AEGVVSPVIKAASLLAGVKAGAKSLARRQARGTLPNDRNQNN
Sequences:
>Translated_122_residues MGWLNEARDLAIILLAIFQLFSVTLMIILVGVLVVMVNELRNLAKEKISPKVEDVLERVKDITENAKSTTTTAKQTASYV AEGVVSPVIKAASLLAGVKAGAKSLARRQARGTLPNDRNQNN >Mature_121_residues GWLNEARDLAIILLAIFQLFSVTLMIILVGVLVVMVNELRNLAKEKISPKVEDVLERVKDITENAKSTTTTAKQTASYVA EGVVSPVIKAASLLAGVKAGAKSLARRQARGTLPNDRNQNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13201; Mature: 13069
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWLNEARDLAIILLAIFQLFSVTLMIILVGVLVVMVNELRNLAKEKISPKVEDVLERVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH DITENAKSTTTTAKQTASYVAEGVVSPVIKAASLLAGVKAGAKSLARRQARGTLPNDRNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NN CC >Mature Secondary Structure GWLNEARDLAIILLAIFQLFSVTLMIILVGVLVVMVNELRNLAKEKISPKVEDVLERVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH DITENAKSTTTTAKQTASYVAEGVVSPVIKAASLLAGVKAGAKSLARRQARGTLPNDRNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA