| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is eryC1 [H]
Identifier: 159897238
GI number: 159897238
Start: 815385
End: 816491
Strand: Reverse
Name: eryC1 [H]
Synonym: Haur_0709
Alternate gene names: 159897238
Gene position: 816491-815385 (Counterclockwise)
Preceding gene: 159897239
Following gene: 159897237
Centisome position: 12.87
GC content: 53.57
Gene sequence:
>1107_bases ATGTCGATCGCATTTAACGACCTTGGGCGACATGTCGCCACCATGGCCGAGGAGATCGAAGCAGCCAGCACCCGGGTGTT GCGCAGCGGTTGGTTTGTTTTGGGCCCAGAAGTTCGCGCCTTTGAAGCTGAATGGGCAGAATATTGTGGCGCACGCCATT GCATTAGCCTGGCAACTGGCACCGATGCCTTGATTTTAGGGCTACGGGCCTTGGGCTTGCAAGCTGGCGACGAAGTGCTG ACCGTAGCCAACGCTGGCAGTTACACCACCTTCGCCACCCATACCGTTGGCGCAACTCCACGCTATGTTGATGTTGATCC TGTGAGCTATACGCTTGATCCCAGTCAATTAGCGGCTGCGATTACCCCACGCACCAAAGTCATTGTGCCGGTACATTTGT ATGGTCAGGTTGCCGATCTTTCGGCGATTTTGGCGATTGCCGCCGACCACCAATTGCCAGTGCTCGAAGATTGTGCCCAA GCCCACGGGGCACGCTACCAAGGCCAACACGTCGGCACATTCGGCGCTTTAGCCACATTTTCGTTCTACCCAACCAAAAA TTTAGGAGCGTTGGGCGATGGCGGGGCCATTATCACCAACGACGATGCCTTAGCCGCCCAAATCAAACAATTGCGCACCT ATGGCTGGTCCAGCAAATATCAAGTAACCATCGAAAAAGGCACCAACAGCCGCCTCGATGAACTTCAAGCAGCCATTTTG CGCGTCAAATTAGCTCATCTTGATGCCCAAAATGCCCGTCGCCAAGCCCTTGCTGCTCGTTATAACGCTGGTTTAGCCGC AACTCCGCTGCAATGCCCACAACTTAATACTGCTCAGCATGTCCAGCATTTGTATGTGGTGCGCGTCGCCGCCGATCAAC GCAATGCCCTGCGCCAACATTTACAAGCAGCAGGTATCGGCAGCGATGTGCATTACCCAATCGCCGACCATCAACAGCCA GCTTGGGCCGAGCGCTACCAAGATGTGAGCTTGCCGATCACCGAAGCTTTAAGCAATGAAATTCTGTCGTTGCCATGCTA CCCTGAACTCAGCGATGCCGAAGTTGATCAGGTAATCGACTGTATTCAAGCTTTTTTTGCTGATTAA
Upstream 100 bases:
>100_bases CGCACCGCTTGACGAACCAGCCTGCTCTCGGTTAAAGTTGGCCTATCGCTGTTAATTCGCAGCCTCGCAGTAGCGAGGCT GTTCTTTTTGGAGCAGAGTA
Downstream 100 bases:
>100_bases CAAGTATTACCGCTCATTGGGCAGCAGCCAAACAAATATGCGGCATTAATCGCTGCTGCCTAGCATTCATACCTCAAGCG CCTATTTGTACCCCACACTG
Product: glutamine--scyllo-inositol transaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSIAFNDLGRHVATMAEEIEAASTRVLRSGWFVLGPEVRAFEAEWAEYCGARHCISLATGTDALILGLRALGLQAGDEVL TVANAGSYTTFATHTVGATPRYVDVDPVSYTLDPSQLAAAITPRTKVIVPVHLYGQVADLSAILAIAADHQLPVLEDCAQ AHGARYQGQHVGTFGALATFSFYPTKNLGALGDGGAIITNDDALAAQIKQLRTYGWSSKYQVTIEKGTNSRLDELQAAIL RVKLAHLDAQNARRQALAARYNAGLAATPLQCPQLNTAQHVQHLYVVRVAADQRNALRQHLQAAGIGSDVHYPIADHQQP AWAERYQDVSLPITEALSNEILSLPCYPELSDAEVDQVIDCIQAFFAD
Sequences:
>Translated_368_residues MSIAFNDLGRHVATMAEEIEAASTRVLRSGWFVLGPEVRAFEAEWAEYCGARHCISLATGTDALILGLRALGLQAGDEVL TVANAGSYTTFATHTVGATPRYVDVDPVSYTLDPSQLAAAITPRTKVIVPVHLYGQVADLSAILAIAADHQLPVLEDCAQ AHGARYQGQHVGTFGALATFSFYPTKNLGALGDGGAIITNDDALAAQIKQLRTYGWSSKYQVTIEKGTNSRLDELQAAIL RVKLAHLDAQNARRQALAARYNAGLAATPLQCPQLNTAQHVQHLYVVRVAADQRNALRQHLQAAGIGSDVHYPIADHQQP AWAERYQDVSLPITEALSNEILSLPCYPELSDAEVDQVIDCIQAFFAD >Mature_367_residues SIAFNDLGRHVATMAEEIEAASTRVLRSGWFVLGPEVRAFEAEWAEYCGARHCISLATGTDALILGLRALGLQAGDEVLT VANAGSYTTFATHTVGATPRYVDVDPVSYTLDPSQLAAAITPRTKVIVPVHLYGQVADLSAILAIAADHQLPVLEDCAQA HGARYQGQHVGTFGALATFSFYPTKNLGALGDGGAIITNDDALAAQIKQLRTYGWSSKYQVTIEKGTNSRLDELQAAILR VKLAHLDAQNARRQALAARYNAGLAATPLQCPQLNTAQHVQHLYVVRVAADQRNALRQHLQAAGIGSDVHYPIADHQQPA WAERYQDVSLPITEALSNEILSLPCYPELSDAEVDQVIDCIQAFFAD
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=366, Percent_Identity=36.6120218579235, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI2367285, Length=342, Percent_Identity=31.8713450292398, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 39681; Mature: 39550
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAFNDLGRHVATMAEEIEAASTRVLRSGWFVLGPEVRAFEAEWAEYCGARHCISLATG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCHHEEEECCC TDALILGLRALGLQAGDEVLTVANAGSYTTFATHTVGATPRYVDVDPVSYTLDPSQLAAA CHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCEEECCCCEEEECHHHHHHH ITPRTKVIVPVHLYGQVADLSAILAIAADHQLPVLEDCAQAHGARYQGQHVGTFGALATF CCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHE SFYPTKNLGALGDGGAIITNDDALAAQIKQLRTYGWSSKYQVTIEKGTNSRLDELQAAIL EECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH RVKLAHLDAQNARRQALAARYNAGLAATPLQCPQLNTAQHVQHLYVVRVAADQRNALRQH HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEEEEECHHHHHHHHH LQAAGIGSDVHYPIADHQQPAWAERYQDVSLPITEALSNEILSLPCYPELSDAEVDQVID HHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHH CIQAFFAD HHHHHHCC >Mature Secondary Structure SIAFNDLGRHVATMAEEIEAASTRVLRSGWFVLGPEVRAFEAEWAEYCGARHCISLATG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCHHEEEECCC TDALILGLRALGLQAGDEVLTVANAGSYTTFATHTVGATPRYVDVDPVSYTLDPSQLAAA CHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCEEECCCCEEEECHHHHHHH ITPRTKVIVPVHLYGQVADLSAILAIAADHQLPVLEDCAQAHGARYQGQHVGTFGALATF CCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHE SFYPTKNLGALGDGGAIITNDDALAAQIKQLRTYGWSSKYQVTIEKGTNSRLDELQAAIL EECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH RVKLAHLDAQNARRQALAARYNAGLAATPLQCPQLNTAQHVQHLYVVRVAADQRNALRQH HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEEEEECHHHHHHHHH LQAAGIGSDVHYPIADHQQPAWAERYQDVSLPITEALSNEILSLPCYPELSDAEVDQVID HHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHH CIQAFFAD HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]