| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897225
Identifier: 159897225
GI number: 159897225
Start: 799805
End: 800275
Strand: Reverse
Name: 159897225
Synonym: Haur_0696
Alternate gene names: NA
Gene position: 800275-799805 (Counterclockwise)
Preceding gene: 159897226
Following gene: 159897224
Centisome position: 12.61
GC content: 35.88
Gene sequence:
>471_bases ATGAGTAATTCAGTCTTTCAAACTCGTGATCAACAATATGCTGCTTCAGCGTATGCTCATATTGAAGAAGTTCTAGAAAA ATATCCAAAGCTGGATGTTAAATCAGGTGATACACTCGCACTGTTGTACAAAAAAAATCGCAAACGCTACGGGGTCATAG CACATAAATTGCCTATATTAATTAGAACTGCTGGTTTAACTCAAGCATTGGCATTTATTAGTTCACGGAGTAAGAAAAAG AAAACTGGCAAAGAAGATGAATTTAGTTTATTCCTAAGCCATCTTGCAAAAACAATAAACATAGATACAAATGATCTTGT TCAATATAGTATCCAACAACACCTATCAAATTATATGTACATAACCCAACAGGTGCTTGATGCACTTTTATGGTATAAGC GCTTTGCTCAAAGTGTACTTGATGTTGATCCGACTGATCAACTTGATGACGAGCAGGGAGCTGAAGTATGA
Upstream 100 bases:
>100_bases ACTGAGCTACCACGCCTGTGGCAAAAACCAATTCAGCTTGGAGGCAAGGCCACCGTCGGGCGCGGAATTTGTCGCGTGAT TGTGAAATAGGAGCAGTAGC
Downstream 100 bases:
>100_bases GAAGTAGTCGTTTAGATATTAAATATGAGCATATTTCAACAAAAGATAGGCCTAGTGATTGTAATGCAGGTTTATGGCTT GATCGCTATTTGCCCACCCA
Product: CRISPR-associated Cmr5 family protein
Products: NA
Alternate protein names: CRISPR-Associated Protein Cmr5 Family
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPILIRTAGLTQALAFISSRSKKK KTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMYITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV
Sequences:
>Translated_156_residues MSNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPILIRTAGLTQALAFISSRSKKK KTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMYITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV >Mature_155_residues SNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPILIRTAGLTQALAFISSRSKKKK TGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMYITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV
Specific function: Unknown
COG id: COG3337
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17861; Mature: 17729
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPIL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH IRTAGLTQALAFISSRSKKKKTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPIL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH IRTAGLTQALAFISSRSKKKKTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMY HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA