Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897225

Identifier: 159897225

GI number: 159897225

Start: 799805

End: 800275

Strand: Reverse

Name: 159897225

Synonym: Haur_0696

Alternate gene names: NA

Gene position: 800275-799805 (Counterclockwise)

Preceding gene: 159897226

Following gene: 159897224

Centisome position: 12.61

GC content: 35.88

Gene sequence:

>471_bases
ATGAGTAATTCAGTCTTTCAAACTCGTGATCAACAATATGCTGCTTCAGCGTATGCTCATATTGAAGAAGTTCTAGAAAA
ATATCCAAAGCTGGATGTTAAATCAGGTGATACACTCGCACTGTTGTACAAAAAAAATCGCAAACGCTACGGGGTCATAG
CACATAAATTGCCTATATTAATTAGAACTGCTGGTTTAACTCAAGCATTGGCATTTATTAGTTCACGGAGTAAGAAAAAG
AAAACTGGCAAAGAAGATGAATTTAGTTTATTCCTAAGCCATCTTGCAAAAACAATAAACATAGATACAAATGATCTTGT
TCAATATAGTATCCAACAACACCTATCAAATTATATGTACATAACCCAACAGGTGCTTGATGCACTTTTATGGTATAAGC
GCTTTGCTCAAAGTGTACTTGATGTTGATCCGACTGATCAACTTGATGACGAGCAGGGAGCTGAAGTATGA

Upstream 100 bases:

>100_bases
ACTGAGCTACCACGCCTGTGGCAAAAACCAATTCAGCTTGGAGGCAAGGCCACCGTCGGGCGCGGAATTTGTCGCGTGAT
TGTGAAATAGGAGCAGTAGC

Downstream 100 bases:

>100_bases
GAAGTAGTCGTTTAGATATTAAATATGAGCATATTTCAACAAAAGATAGGCCTAGTGATTGTAATGCAGGTTTATGGCTT
GATCGCTATTTGCCCACCCA

Product: CRISPR-associated Cmr5 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Cmr5 Family

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPILIRTAGLTQALAFISSRSKKK
KTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMYITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV

Sequences:

>Translated_156_residues
MSNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPILIRTAGLTQALAFISSRSKKK
KTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMYITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV
>Mature_155_residues
SNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPILIRTAGLTQALAFISSRSKKKK
TGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMYITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV

Specific function: Unknown

COG id: COG3337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17861; Mature: 17729

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
IRTAGLTQALAFISSRSKKKKTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNSVFQTRDQQYAASAYAHIEEVLEKYPKLDVKSGDTLALLYKKNRKRYGVIAHKLPIL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
IRTAGLTQALAFISSRSKKKKTGKEDEFSLFLSHLAKTINIDTNDLVQYSIQQHLSNYMY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ITQQVLDALLWYKRFAQSVLDVDPTDQLDDEQGAEV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA