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The map label for this gene is yloA [H]

Identifier: 159897147

GI number: 159897147

Start: 713594

End: 715330

Strand: Reverse

Name: yloA [H]

Synonym: Haur_0618

Alternate gene names: 159897147

Gene position: 715330-713594 (Counterclockwise)

Preceding gene: 159897155

Following gene: 159897136

Centisome position: 11.27

GC content: 50.95

Gene sequence:

>1737_bases
ATGCACATTGATGCGCTAGTTGTTGCAGCGATTGTCGCTGAATTACAGATCTTGGTTGGCGGCAAAATTCAACAGGTGGT
TTTGCCAAATCCTGATAGTGTAGGTTTTGAAGTCTATGCTGATGGCCAGCGCCATCAGTTATTGCTTTCGGCCAATCCTA
AATTTGCCCGCATGCATACTACCCCAACCAAGCTAACTCGTGATCCGAATGCCGATTCGCCTTTGTTGCTATTATTGCGT
AAATATGTTCGTGGTGGACGGATTACCAAAATCGAATCTGCGCCATTGGAACGGGTTATTTCGCTCAGTATAGCCAAGAT
GCCGATTCCTCGCAAGGAACTTGAGCCTGACGATGATGACGACGATGAGGTGATGCTTACGCCGCGTTATAGTGAGTTGG
TACTAGAAATTATCGGTCATTCATCAAATATTATTTTGGTCGATGATAATGGCTTGGTCTTGGAAAGTATTCGTCACTAT
AACCCGCAACGTTCGCAACGCCCAATCATGCCACGTGGCATGTACGAAGCGCCGCCCAGCCAAGGCAAATCTGACCCGCT
CCAAGCAACCGCTGAACAAATTGCGGCCTTAGGTGGCGATTTGGCCAAAGCCTTGGTGACCGAATATAGTGGCATCTCGC
CGCAAACTGGCCGTGAAATTGCTTGGCGGGCAGTCGGCGCAACCAGCGTCGAAATTACGCCAGAACTAGATTTTGCACAG
ATTGCCCAGCTTTTGCGCCAACTTACCAGCCTTAGCAGGAGCGAGCCAACCCTTGCCCGCAATGCTGATGGCACGCCAAT
TGGGATTGCTGCCTTTAATTTGCAGCACCAAGCGCATACTGAAACCTTCCCCAGCATGAACGAGGCCTTGGCAACCGCCT
TTGCTGAGCTTGATCAGGTGACAGCGCACGCTCAACGGCGTGAAGCCTTGCTCGAACGGGTGGCTGAAGCTCAGCGCCGC
ATCAAAACCAAAGCTGATCAATTACGCACTCAGTTGGCGCGGGTTGAGCAACTTGAGCGTTTGCGCTGGGAAGGTGAGAT
GATTTTTGGCTATATTTATGCGATCAAACCTGGACAAAGCGAATTGCTGCTTGACCAAGGCGTGATCACGCTTGATCCAA
CATTATCGGCGGTCGAGAATGCTCAAGCAAAATTTCGCGAGTACGACAAAGCCAAAGGTGCATTAGAGGATGTGCCACAA
CTCTTGGAGCAAACCGAGGCTCAAGCCGAATATTTGCAACAAACCAACGATCTGTTGAGTTTGGCCGAGAGTTTTGCTGA
AATTGAGCAATTTGAGCGTGAGTTGATTGCTGGTGGCTGGCTGCGCCAAACGATTGGCAAAGCCAAAAGCAAGCCCAATT
CTAGCGTTGGGCGTGGCCCGTTGCGGGTAATTTCGCCCGATGGCTGGACAATTTTCGTTGGTCGTACCGCTGACCAAAAC
GATGAAGTAACCTTCAAACTTGGTCAGCCCGAGGATTATTGGTTGCATGCCCGTGAACGAACTGGCGGCCATGTGATTAT
TCGTATGCAATCGGCGAATGTGCCGCCGCGTACCCTTGAGCAAGCGGCGCAACTGGCGGCCTACTATTCATCGGCTCGCA
ACGATGGCGCAGTTGAAGTCGATATTGCCTTACGCAAACATGTGCGCAAAATCAAAGGCGGCCCACCTGGTTTAGTGCGC
TATACCGCTGAGCAAACCCTACGCGTCGCACCCCAAAAAGAACCGAAGAGAACATAG

Upstream 100 bases:

>100_bases
GGTTGAGTTCTGGGTGTGACACAATGCCTCCTAAACTAAGGGAATTATTGACGTTCTGCCAATGCTTGAGTACGATTGAG
CCATTGAAGGAGAATCGTCT

Downstream 100 bases:

>100_bases
GAACAAGGCAGAAGTCAAACATCAAAAGGCAAAATCGCGATCGCAATTTAACGCAGCGGCGCATAGCAAGAGATAAGGGA
TGAAATTTAACCGCGAAGAA

Product: fibronectin-binding A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MHIDALVVAAIVAELQILVGGKIQQVVLPNPDSVGFEVYADGQRHQLLLSANPKFARMHTTPTKLTRDPNADSPLLLLLR
KYVRGGRITKIESAPLERVISLSIAKMPIPRKELEPDDDDDDEVMLTPRYSELVLEIIGHSSNIILVDDNGLVLESIRHY
NPQRSQRPIMPRGMYEAPPSQGKSDPLQATAEQIAALGGDLAKALVTEYSGISPQTGREIAWRAVGATSVEITPELDFAQ
IAQLLRQLTSLSRSEPTLARNADGTPIGIAAFNLQHQAHTETFPSMNEALATAFAELDQVTAHAQRREALLERVAEAQRR
IKTKADQLRTQLARVEQLERLRWEGEMIFGYIYAIKPGQSELLLDQGVITLDPTLSAVENAQAKFREYDKAKGALEDVPQ
LLEQTEAQAEYLQQTNDLLSLAESFAEIEQFERELIAGGWLRQTIGKAKSKPNSSVGRGPLRVISPDGWTIFVGRTADQN
DEVTFKLGQPEDYWLHARERTGGHVIIRMQSANVPPRTLEQAAQLAAYYSSARNDGAVEVDIALRKHVRKIKGGPPGLVR
YTAEQTLRVAPQKEPKRT

Sequences:

>Translated_578_residues
MHIDALVVAAIVAELQILVGGKIQQVVLPNPDSVGFEVYADGQRHQLLLSANPKFARMHTTPTKLTRDPNADSPLLLLLR
KYVRGGRITKIESAPLERVISLSIAKMPIPRKELEPDDDDDDEVMLTPRYSELVLEIIGHSSNIILVDDNGLVLESIRHY
NPQRSQRPIMPRGMYEAPPSQGKSDPLQATAEQIAALGGDLAKALVTEYSGISPQTGREIAWRAVGATSVEITPELDFAQ
IAQLLRQLTSLSRSEPTLARNADGTPIGIAAFNLQHQAHTETFPSMNEALATAFAELDQVTAHAQRREALLERVAEAQRR
IKTKADQLRTQLARVEQLERLRWEGEMIFGYIYAIKPGQSELLLDQGVITLDPTLSAVENAQAKFREYDKAKGALEDVPQ
LLEQTEAQAEYLQQTNDLLSLAESFAEIEQFERELIAGGWLRQTIGKAKSKPNSSVGRGPLRVISPDGWTIFVGRTADQN
DEVTFKLGQPEDYWLHARERTGGHVIIRMQSANVPPRTLEQAAQLAAYYSSARNDGAVEVDIALRKHVRKIKGGPPGLVR
YTAEQTLRVAPQKEPKRT
>Mature_578_residues
MHIDALVVAAIVAELQILVGGKIQQVVLPNPDSVGFEVYADGQRHQLLLSANPKFARMHTTPTKLTRDPNADSPLLLLLR
KYVRGGRITKIESAPLERVISLSIAKMPIPRKELEPDDDDDDEVMLTPRYSELVLEIIGHSSNIILVDDNGLVLESIRHY
NPQRSQRPIMPRGMYEAPPSQGKSDPLQATAEQIAALGGDLAKALVTEYSGISPQTGREIAWRAVGATSVEITPELDFAQ
IAQLLRQLTSLSRSEPTLARNADGTPIGIAAFNLQHQAHTETFPSMNEALATAFAELDQVTAHAQRREALLERVAEAQRR
IKTKADQLRTQLARVEQLERLRWEGEMIFGYIYAIKPGQSELLLDQGVITLDPTLSAVENAQAKFREYDKAKGALEDVPQ
LLEQTEAQAEYLQQTNDLLSLAESFAEIEQFERELIAGGWLRQTIGKAKSKPNSSVGRGPLRVISPDGWTIFVGRTADQN
DEVTFKLGQPEDYWLHARERTGGHVIIRMQSANVPPRTLEQAAQLAAYYSSARNDGAVEVDIALRKHVRKIKGGPPGLVR
YTAEQTLRVAPQKEPKRT

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 64052; Mature: 64052

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDALVVAAIVAELQILVGGKIQQVVLPNPDSVGFEVYADGQRHQLLLSANPKFARMHT
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEC
TPTKLTRDPNADSPLLLLLRKYVRGGRITKIESAPLERVISLSIAKMPIPRKELEPDDDD
CCHHCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCHHHCCCCCCC
DDEVMLTPRYSELVLEIIGHSSNIILVDDNGLVLESIRHYNPQRSQRPIMPRGMYEAPPS
CCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QGKSDPLQATAEQIAALGGDLAKALVTEYSGISPQTGREIAWRAVGATSVEITPELDFAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCEEEECCCCCHHH
IAQLLRQLTSLSRSEPTLARNADGTPIGIAAFNLQHQAHTETFPSMNEALATAFAELDQV
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHH
TAHAQRREALLERVAEAQRRIKTKADQLRTQLARVEQLERLRWEGEMIFGYIYAIKPGQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCC
ELLLDQGVITLDPTLSAVENAQAKFREYDKAKGALEDVPQLLEQTEAQAEYLQQTNDLLS
CEEHCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAESFAEIEQFERELIAGGWLRQTIGKAKSKPNSSVGRGPLRVISPDGWTIFVGRTADQN
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCC
DEVTFKLGQPEDYWLHARERTGGHVIIRMQSANVPPRTLEQAAQLAAYYSSARNDGAVEV
CCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
DIALRKHVRKIKGGPPGLVRYTAEQTLRVAPQKEPKRT
EHHHHHHHHHHCCCCCCEEEECHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHIDALVVAAIVAELQILVGGKIQQVVLPNPDSVGFEVYADGQRHQLLLSANPKFARMHT
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEC
TPTKLTRDPNADSPLLLLLRKYVRGGRITKIESAPLERVISLSIAKMPIPRKELEPDDDD
CCHHCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCHHHCCCCCCC
DDEVMLTPRYSELVLEIIGHSSNIILVDDNGLVLESIRHYNPQRSQRPIMPRGMYEAPPS
CCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QGKSDPLQATAEQIAALGGDLAKALVTEYSGISPQTGREIAWRAVGATSVEITPELDFAQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCEEEECCCCCHHH
IAQLLRQLTSLSRSEPTLARNADGTPIGIAAFNLQHQAHTETFPSMNEALATAFAELDQV
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHH
TAHAQRREALLERVAEAQRRIKTKADQLRTQLARVEQLERLRWEGEMIFGYIYAIKPGQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCC
ELLLDQGVITLDPTLSAVENAQAKFREYDKAKGALEDVPQLLEQTEAQAEYLQQTNDLLS
CEEHCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAESFAEIEQFERELIAGGWLRQTIGKAKSKPNSSVGRGPLRVISPDGWTIFVGRTADQN
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCC
DEVTFKLGQPEDYWLHARERTGGHVIIRMQSANVPPRTLEQAAQLAAYYSSARNDGAVEV
CCEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
DIALRKHVRKIKGGPPGLVRYTAEQTLRVAPQKEPKRT
EHHHHHHHHHHCCCCCCEEEECHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]