| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is resE [H]
Identifier: 159897122
GI number: 159897122
Start: 682992
End: 684185
Strand: Reverse
Name: resE [H]
Synonym: Haur_0593
Alternate gene names: 159897122
Gene position: 684185-682992 (Counterclockwise)
Preceding gene: 159897123
Following gene: 159897121
Centisome position: 10.78
GC content: 49.5
Gene sequence:
>1194_bases ATGGCAGGTTCGACTCGGGTTCTGTACATTGAGGATAATCACGATAATCAACGTTTAGTACGACGCGTTCTCGCAACTCG TGGCTATCAGATTATCATCGCCAATGACGGCAACGAAGGTTGGAAATCGGCCCAAACTGATCGCCCTGATCTGATTTTGA TGGATATTAATTTGCCTGGCTTGAATGGCTATGAATTAACCACCAAATTCAAAGCCACGCCGCAACTGGCTTCGGTGCCA ATTGTAGCTTTAACTGCCAATACCACTCCAGGCGATCGCGAACGAGCTTTGGCGGCTGGCTGTGATGGCTATATTTCTAA GCCAATCGATCCACGGGCCTTGCCCGATTTGGTCGCCAGCTATATCGGTGGCACACGCGAAGTTTTAGAAACTGCCGAAG CGCCGAGCGTGATGCGCGAATATAGCCAACAACTGGTCGGGCGCTTGGAATCGCATGTACGCGAGTTGGAAACCGCCAAT AATCGCTTGACACGGCTTGATCAAGCAAAAAACGATTTCTTGGCGACAATTTCGCACGAGCTACGCACCCCGCTGACCGT GATTCATGGCTATATTGATTTGCTCAACATGCAGGCGCTTGGCCCAGTCAGTGATGGTCAACGTGAAGCCCTCGAGTTGA TGAAGCGCAATAGCACCCGCCTATTACGCCATATCAACGATTTGATTTACCTGCAACAAGTGCGCTCGAACCAAATGGAT TTTGCCCAAGCCGATTTACGCGGCTTAGTTCAATCGATTTGTAACGATATGCAGCCAACCTTCTTGGAAAAAAACCAAAC CTTGGTGCGCAACATTTATGTCAGCGGCATTCAAACACCGTTGATGATTCATATGGATGTGCATGGTGTGGATAATGCTG TGCGGCACTTGCTCGAAAATGCAACCCAATACACCGCCCAAGGTGGGGTAATTCAAGTTTCGGTCTATCAAGATGATCAA TTGGTGCGGGTTTCAATTCGCGACAATGGCGTGGGCATTCCTGAAGACGACTTCGAACGAATTTTCGAGCCATTTGTGCG GCTCGATGATACACTCGCAAGTATTGGCGGGGCCGGCTTGGGCTTGGTGATCGCCAAACACGTTGCTGAAGCCCACAATG GCACAGTTTCGCTAGAAAGCACCGTGGGGGTTGGCAGCATCTTCACTTTACAACTGCCAGTCAATCATCAATAA
Upstream 100 bases:
>100_bases CAAAGTTGGGGTTGGTAGCACCTTCTCATTTGCGATCGCCACCGCCAGCATCCCAGCGCCGATTGAACAACAATCACCTA GTTAGAAGGAAATAACCGTC
Downstream 100 bases:
>100_bases CCAATAGCAAGCTCTCGGTGCAACATCAACCCGAGAGCTTGCTTTTTTAACCGAATGTTGCTAGGTTTGCATACCCTCAC CCCCTGGCTCCCGCACACGA
Product: response regulator receiver sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MAGSTRVLYIEDNHDNQRLVRRVLATRGYQIIIANDGNEGWKSAQTDRPDLILMDINLPGLNGYELTTKFKATPQLASVP IVALTANTTPGDRERALAAGCDGYISKPIDPRALPDLVASYIGGTREVLETAEAPSVMREYSQQLVGRLESHVRELETAN NRLTRLDQAKNDFLATISHELRTPLTVIHGYIDLLNMQALGPVSDGQREALELMKRNSTRLLRHINDLIYLQQVRSNQMD FAQADLRGLVQSICNDMQPTFLEKNQTLVRNIYVSGIQTPLMIHMDVHGVDNAVRHLLENATQYTAQGGVIQVSVYQDDQ LVRVSIRDNGVGIPEDDFERIFEPFVRLDDTLASIGGAGLGLVIAKHVAEAHNGTVSLESTVGVGSIFTLQLPVNHQ
Sequences:
>Translated_397_residues MAGSTRVLYIEDNHDNQRLVRRVLATRGYQIIIANDGNEGWKSAQTDRPDLILMDINLPGLNGYELTTKFKATPQLASVP IVALTANTTPGDRERALAAGCDGYISKPIDPRALPDLVASYIGGTREVLETAEAPSVMREYSQQLVGRLESHVRELETAN NRLTRLDQAKNDFLATISHELRTPLTVIHGYIDLLNMQALGPVSDGQREALELMKRNSTRLLRHINDLIYLQQVRSNQMD FAQADLRGLVQSICNDMQPTFLEKNQTLVRNIYVSGIQTPLMIHMDVHGVDNAVRHLLENATQYTAQGGVIQVSVYQDDQ LVRVSIRDNGVGIPEDDFERIFEPFVRLDDTLASIGGAGLGLVIAKHVAEAHNGTVSLESTVGVGSIFTLQLPVNHQ >Mature_396_residues AGSTRVLYIEDNHDNQRLVRRVLATRGYQIIIANDGNEGWKSAQTDRPDLILMDINLPGLNGYELTTKFKATPQLASVPI VALTANTTPGDRERALAAGCDGYISKPIDPRALPDLVASYIGGTREVLETAEAPSVMREYSQQLVGRLESHVRELETANN RLTRLDQAKNDFLATISHELRTPLTVIHGYIDLLNMQALGPVSDGQREALELMKRNSTRLLRHINDLIYLQQVRSNQMDF AQADLRGLVQSICNDMQPTFLEKNQTLVRNIYVSGIQTPLMIHMDVHGVDNAVRHLLENATQYTAQGGVIQVSVYQDDQL VRVSIRDNGVGIPEDDFERIFEPFVRLDDTLASIGGAGLGLVIAKHVAEAHNGTVSLESTVGVGSIFTLQLPVNHQ
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI145693157, Length=250, Percent_Identity=29.6, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1788713, Length=285, Percent_Identity=29.1228070175439, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789149, Length=273, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788393, Length=264, Percent_Identity=29.1666666666667, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI87081816, Length=268, Percent_Identity=29.4776119402985, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1786912, Length=231, Percent_Identity=28.1385281385281, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1788549, Length=228, Percent_Identity=30.2631578947368, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790436, Length=282, Percent_Identity=27.3049645390071, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI48994928, Length=276, Percent_Identity=25.3623188405797, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790346, Length=233, Percent_Identity=26.1802575107296, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=27.0042194092827, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786783, Length=261, Percent_Identity=27.9693486590038, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787894, Length=234, Percent_Identity=27.3504273504274, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1786599, Length=111, Percent_Identity=35.1351351351351, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87082012, Length=104, Percent_Identity=35.5769230769231, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789808, Length=267, Percent_Identity=25.4681647940075, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786911, Length=105, Percent_Identity=35.2380952380952, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1788394, Length=181, Percent_Identity=28.1767955801105, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790861, Length=247, Percent_Identity=25.5060728744939, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=77, Percent_Identity=45.4545454545455, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 43906; Mature: 43775
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSTRVLYIEDNHDNQRLVRRVLATRGYQIIIANDGNEGWKSAQTDRPDLILMDINLPG CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCC LNGYELTTKFKATPQLASVPIVALTANTTPGDRERALAAGCDGYISKPIDPRALPDLVAS CCCCEEEEEEECCCCHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH YIGGTREVLETAEAPSVMREYSQQLVGRLESHVRELETANNRLTRLDQAKNDFLATISHE HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTPLTVIHGYIDLLNMQALGPVSDGQREALELMKRNSTRLLRHINDLIYLQQVRSNQMD HHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH FAQADLRGLVQSICNDMQPTFLEKNQTLVRNIYVSGIQTPLMIHMDVHGVDNAVRHLLEN HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ATQYTAQGGVIQVSVYQDDQLVRVSIRDNGVGIPEDDFERIFEPFVRLDDTLASIGGAGL HHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH GLVIAKHVAEAHNGTVSLESTVGVGSIFTLQLPVNHQ HHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCC >Mature Secondary Structure AGSTRVLYIEDNHDNQRLVRRVLATRGYQIIIANDGNEGWKSAQTDRPDLILMDINLPG CCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCC LNGYELTTKFKATPQLASVPIVALTANTTPGDRERALAAGCDGYISKPIDPRALPDLVAS CCCCEEEEEEECCCCHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH YIGGTREVLETAEAPSVMREYSQQLVGRLESHVRELETANNRLTRLDQAKNDFLATISHE HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRTPLTVIHGYIDLLNMQALGPVSDGQREALELMKRNSTRLLRHINDLIYLQQVRSNQMD HHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCH FAQADLRGLVQSICNDMQPTFLEKNQTLVRNIYVSGIQTPLMIHMDVHGVDNAVRHLLEN HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ATQYTAQGGVIQVSVYQDDQLVRVSIRDNGVGIPEDDFERIFEPFVRLDDTLASIGGAGL HHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH GLVIAKHVAEAHNGTVSLESTVGVGSIFTLQLPVNHQ HHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]