Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897031

Identifier: 159897031

GI number: 159897031

Start: 579618

End: 581315

Strand: Reverse

Name: 159897031

Synonym: Haur_0499

Alternate gene names: NA

Gene position: 581315-579618 (Counterclockwise)

Preceding gene: 159897032

Following gene: 159897030

Centisome position: 9.16

GC content: 53.53

Gene sequence:

>1698_bases
ATGTTAGATCGTCGCGAAATTACCCATAATATCGATCTGTTGCTGTCAACCTTGCCGCCACGTTTGGCCGAGCCGTTGGC
AACCCATGAACAGAAAGATCAAGTTATAGAAATTGTCATGGATTTGGGGCGCTTGCCCGAGGCGCGTTTTCGCCACGACC
AATCAAGTTTCCTTAGCGAAACTGAGGTCTCGCGCGAAGATCTCGATTATGTGACCGAGCGGATTGGTCAATTTGGTGAA
GATAATCGCGCTGGGATTCAGCGCACGCTGCACCGCATTTCAGCCATTCGCAACCGCTCTGGGGTGGTGATCGGTCTGAC
CTGTCGGGTTGGCCGCGCCGTTTATGGCACAATCGAAATCGTGCGCGATTTGGTCGAGGCTGGTAAATCGATCTTGATTC
TGGGCAAGCCTGGGACAGGTAAAACCACCATGCTGCGCGAAGTCGCCCGCGTCTTGGCCGACGACTTTCTCAAGCGGGTG
GTGATCGTCGATACCTCGAACGAAATCGCTGGCGATGGCGATATTCCTCACCCAGGGATTGGTCGCGCTCGGCGAATGCA
AGTAGCTCGGCCAGCCGAACAGCACAATGTGATGATCGAAGCGGTCGAAAACCACATGCCCCAAGTCATTGTGATCGATG
AAATTGGGACGGAGTTGGAAGCTCAAGCTGCTCGCACCATCGCCGAACGTGGGGTGCAATTGGTTGGTACGGCTCACGGG
AATACCTTGGAAAACCTGATGCTCAACCCAACTCTCTCCGATCTGATCGGCGGGATTCAGGCAGTAACCTTGGGCGATGA
AGAAGCTCGACGGCGGGGAACCCAAAAAACCGTGCTCGAACGCAAAGCGCCGCCAACCTTCGATGTGTTGGTCGAAATTC
AAAGCTGGGACGATGTAACGATTTATCAAGAAGTCGCTTCAGCCGTCGATTCGATTTTGCAGGGCAATGAGCCAACCGCC
GAACAACGCACCAAGGACGAGCAAGGCGAAATTGTGGTGCACGAAGGCCGCCCAGAACGGCTTGATAGCGAAGCTAGCAC
CATGCTCACGCGGCGTGGCGGCTATCGCAGCCGTGAACGCGACCGTGATCGTGACCATGGCGAACGCGACTGGCGGCGTA
AAAGCGAACGGCGTGAAGCCCAACGCGAAGAGCGCGAACGCTATAGCTTGGCACTGAATGGCAGCACTAGCCCAAAAACC
GAAGAACCAAGCGTGCTGGTTAAAAAGCCTGGTAAAAATGCGCCAGCCAAGATTTTTGCCTTTGGGGTTAGCCGCAATCG
CTTGGAAAAAGCCTTAGATCGTTTGGGCATTACTGCTAGTTTGGTGCGCGAAATGGAACAAGCCACGATGGTGATTACGC
TGAAAAATTACTATCGTCAGCACCCAACTCGGCTGCGTGATGCCGAAGAACGTGGAATTCCAGTGTATGTGCTACGCTCG
AATACCCAAACCCAAATGGAAGAATGCCTCGGCTCGGCCTTCGAAATCAGCATCAGTCCTAGCGACCCGCTGAGCGAGGC
CATGGAAGAGGTTGAAGAAGCAATCAGTCAAGTCATGGATGGCTCAACCGAAAGTATCGAACTGAGTCCGCAAAGTTCCT
ATGTGCGTAGGTTGCAACATCAGATTGTTGAGCGGTACAATCTACAATCAGAAAGTACTGGCAAAGAACCACGTCGCCGC
ATTCGGATCTTTCGCTAA

Upstream 100 bases:

>100_bases
GGAACGCGAGAAAGCGTCGTCAATCCGTCGCTGTCATCGTCGGTTCAATCCGAACCGTGTATCTAACACACCCCGGCGTG
TGTTTGAGAGGGATGCAACT

Downstream 100 bases:

>100_bases
AATCGGCAACGTGGCCTCAACTTGTTGGACTGTAGGGGAACCATGAGCTTGTTCATTACCTTTGAAGGCCCAGAAGGTAG
CGGGAAGAGCACCCAAGCCC

Product: single-stranded nucleic acid binding R3H domain-containing protein

Products: NA

Alternate protein names: R3H Domain Protein; ATPase; AAA ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; ATPase Like Protein; Sporulation Stage III Protein AA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTERIGQFGE
DNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRV
VIVDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG
NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSILQGNEPTA
EQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRERDRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKT
EEPSVLVKKPGKNAPAKIFAFGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS
NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQHQIVERYNLQSESTGKEPRRR
IRIFR

Sequences:

>Translated_565_residues
MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTERIGQFGE
DNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRV
VIVDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG
NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSILQGNEPTA
EQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRERDRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKT
EEPSVLVKKPGKNAPAKIFAFGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS
NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQHQIVERYNLQSESTGKEPRRR
IRIFR
>Mature_565_residues
MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTERIGQFGE
DNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRV
VIVDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG
NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSILQGNEPTA
EQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRERDRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKT
EEPSVLVKKPGKNAPAKIFAFGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS
NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQHQIVERYNLQSESTGKEPRRR
IRIFR

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63766; Mature: 63766

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSE
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH
TEVSREDLDYVTERIGQFGEDNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEI
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCHHHHHHHHH
VRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPGI
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC
GRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG
CHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC
NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVT
CHHHHHHCCCCHHHHHCCCEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHH
IYQEVASAVDSILQGNEPTAEQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRER
HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHH
DRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKTEEPSVLVKKPGKNAPAKIFA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCCEEEE
FGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS
ECCCHHHHHHHHHHHCCHHHHHHHHHHHHEEEEHHHHHHHCCHHHHCHHHCCCEEEEECC
NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQH
CCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
QIVERYNLQSESTGKEPRRRIRIFR
HHHHHHCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSE
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH
TEVSREDLDYVTERIGQFGEDNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEI
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCHHHHHHHHH
VRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPGI
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC
GRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG
CHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC
NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVT
CHHHHHHCCCCHHHHHCCCEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHH
IYQEVASAVDSILQGNEPTAEQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRER
HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHH
DRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKTEEPSVLVKKPGKNAPAKIFA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCCEEEE
FGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS
ECCCHHHHHHHHHHHCCHHHHHHHHHHHHEEEEHHHHHHHCCHHHHCHHHCCCEEEEECC
NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQH
CCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH
QIVERYNLQSESTGKEPRRRIRIFR
HHHHHHCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA