| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897031
Identifier: 159897031
GI number: 159897031
Start: 579618
End: 581315
Strand: Reverse
Name: 159897031
Synonym: Haur_0499
Alternate gene names: NA
Gene position: 581315-579618 (Counterclockwise)
Preceding gene: 159897032
Following gene: 159897030
Centisome position: 9.16
GC content: 53.53
Gene sequence:
>1698_bases ATGTTAGATCGTCGCGAAATTACCCATAATATCGATCTGTTGCTGTCAACCTTGCCGCCACGTTTGGCCGAGCCGTTGGC AACCCATGAACAGAAAGATCAAGTTATAGAAATTGTCATGGATTTGGGGCGCTTGCCCGAGGCGCGTTTTCGCCACGACC AATCAAGTTTCCTTAGCGAAACTGAGGTCTCGCGCGAAGATCTCGATTATGTGACCGAGCGGATTGGTCAATTTGGTGAA GATAATCGCGCTGGGATTCAGCGCACGCTGCACCGCATTTCAGCCATTCGCAACCGCTCTGGGGTGGTGATCGGTCTGAC CTGTCGGGTTGGCCGCGCCGTTTATGGCACAATCGAAATCGTGCGCGATTTGGTCGAGGCTGGTAAATCGATCTTGATTC TGGGCAAGCCTGGGACAGGTAAAACCACCATGCTGCGCGAAGTCGCCCGCGTCTTGGCCGACGACTTTCTCAAGCGGGTG GTGATCGTCGATACCTCGAACGAAATCGCTGGCGATGGCGATATTCCTCACCCAGGGATTGGTCGCGCTCGGCGAATGCA AGTAGCTCGGCCAGCCGAACAGCACAATGTGATGATCGAAGCGGTCGAAAACCACATGCCCCAAGTCATTGTGATCGATG AAATTGGGACGGAGTTGGAAGCTCAAGCTGCTCGCACCATCGCCGAACGTGGGGTGCAATTGGTTGGTACGGCTCACGGG AATACCTTGGAAAACCTGATGCTCAACCCAACTCTCTCCGATCTGATCGGCGGGATTCAGGCAGTAACCTTGGGCGATGA AGAAGCTCGACGGCGGGGAACCCAAAAAACCGTGCTCGAACGCAAAGCGCCGCCAACCTTCGATGTGTTGGTCGAAATTC AAAGCTGGGACGATGTAACGATTTATCAAGAAGTCGCTTCAGCCGTCGATTCGATTTTGCAGGGCAATGAGCCAACCGCC GAACAACGCACCAAGGACGAGCAAGGCGAAATTGTGGTGCACGAAGGCCGCCCAGAACGGCTTGATAGCGAAGCTAGCAC CATGCTCACGCGGCGTGGCGGCTATCGCAGCCGTGAACGCGACCGTGATCGTGACCATGGCGAACGCGACTGGCGGCGTA AAAGCGAACGGCGTGAAGCCCAACGCGAAGAGCGCGAACGCTATAGCTTGGCACTGAATGGCAGCACTAGCCCAAAAACC GAAGAACCAAGCGTGCTGGTTAAAAAGCCTGGTAAAAATGCGCCAGCCAAGATTTTTGCCTTTGGGGTTAGCCGCAATCG CTTGGAAAAAGCCTTAGATCGTTTGGGCATTACTGCTAGTTTGGTGCGCGAAATGGAACAAGCCACGATGGTGATTACGC TGAAAAATTACTATCGTCAGCACCCAACTCGGCTGCGTGATGCCGAAGAACGTGGAATTCCAGTGTATGTGCTACGCTCG AATACCCAAACCCAAATGGAAGAATGCCTCGGCTCGGCCTTCGAAATCAGCATCAGTCCTAGCGACCCGCTGAGCGAGGC CATGGAAGAGGTTGAAGAAGCAATCAGTCAAGTCATGGATGGCTCAACCGAAAGTATCGAACTGAGTCCGCAAAGTTCCT ATGTGCGTAGGTTGCAACATCAGATTGTTGAGCGGTACAATCTACAATCAGAAAGTACTGGCAAAGAACCACGTCGCCGC ATTCGGATCTTTCGCTAA
Upstream 100 bases:
>100_bases GGAACGCGAGAAAGCGTCGTCAATCCGTCGCTGTCATCGTCGGTTCAATCCGAACCGTGTATCTAACACACCCCGGCGTG TGTTTGAGAGGGATGCAACT
Downstream 100 bases:
>100_bases AATCGGCAACGTGGCCTCAACTTGTTGGACTGTAGGGGAACCATGAGCTTGTTCATTACCTTTGAAGGCCCAGAAGGTAG CGGGAAGAGCACCCAAGCCC
Product: single-stranded nucleic acid binding R3H domain-containing protein
Products: NA
Alternate protein names: R3H Domain Protein; ATPase; AAA ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; ATPase Like Protein; Sporulation Stage III Protein AA
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTERIGQFGE DNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRV VIVDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSILQGNEPTA EQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRERDRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKT EEPSVLVKKPGKNAPAKIFAFGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQHQIVERYNLQSESTGKEPRRR IRIFR
Sequences:
>Translated_565_residues MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTERIGQFGE DNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRV VIVDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSILQGNEPTA EQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRERDRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKT EEPSVLVKKPGKNAPAKIFAFGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQHQIVERYNLQSESTGKEPRRR IRIFR >Mature_565_residues MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSETEVSREDLDYVTERIGQFGE DNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRV VIVDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVTIYQEVASAVDSILQGNEPTA EQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRERDRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKT EEPSVLVKKPGKNAPAKIFAFGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQHQIVERYNLQSESTGKEPRRR IRIFR
Specific function: Unknown
COG id: COG3854
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63766; Mature: 63766
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS51061 R3H
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSE CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH TEVSREDLDYVTERIGQFGEDNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEI HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCHHHHHHHHH VRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPGI HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC GRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG CHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVT CHHHHHHCCCCHHHHHCCCEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHH IYQEVASAVDSILQGNEPTAEQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRER HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHH DRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKTEEPSVLVKKPGKNAPAKIFA CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCCEEEE FGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS ECCCHHHHHHHHHHHCCHHHHHHHHHHHHEEEEHHHHHHHCCHHHHCHHHCCCEEEEECC NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQH CCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH QIVERYNLQSESTGKEPRRRIRIFR HHHHHHCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MLDRREITHNIDLLLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHDQSSFLSE CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHH TEVSREDLDYVTERIGQFGEDNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEI HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHCHHHHHHHHH VRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPGI HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC GRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHG CHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCC NTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQSWDDVT CHHHHHHCCCCHHHHHCCCEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEEEECCCCCHH IYQEVASAVDSILQGNEPTAEQRTKDEQGEIVVHEGRPERLDSEASTMLTRRGGYRSRER HHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCHHH DRDRDHGERDWRRKSERREAQREERERYSLALNGSTSPKTEEPSVLVKKPGKNAPAKIFA CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCCEEEE FGVSRNRLEKALDRLGITASLVREMEQATMVITLKNYYRQHPTRLRDAEERGIPVYVLRS ECCCHHHHHHHHHHHCCHHHHHHHHHHHHEEEEHHHHHHHCCHHHHCHHHCCCEEEEECC NTQTQMEECLGSAFEISISPSDPLSEAMEEVEEAISQVMDGSTESIELSPQSSYVRRLQH CCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH QIVERYNLQSESTGKEPRRRIRIFR HHHHHHCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA