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The map label for this gene is yurY [H]

Identifier: 159896945

GI number: 159896945

Start: 482321

End: 483112

Strand: Reverse

Name: yurY [H]

Synonym: Haur_0413

Alternate gene names: 159896945

Gene position: 483112-482321 (Counterclockwise)

Preceding gene: 159896946

Following gene: 159896944

Centisome position: 7.61

GC content: 48.36

Gene sequence:

>792_bases
ATGAGCGCCAACAATTTGGTCATTCGCAACTTGCACGTTGCGGTCGATGGCAAAGAAATTCTTAAAGGCATTAATCTCAC
CATCGAAGAAGGCAAAATTCACGCCATCATGGGGCCAAATGGCTCAGGCAAGTCAACCTTGGCATACACCCTCGCTGGTC
ACCCACGCTATGAAGTGACCGAAGGCGAAGTTTGGTACAAAGGCCAAGATGTGCTTGATCTCGAACCAAATGATCGTTCA
AAATTGGGCTTATTCTTGGCCTTCCAATATCCAGTGGCGGTAGCTGGCGTAACTGTTGCCAATTTCTTGCGAGCAGCCTT
GAATGCCCATCGCGCTCAAGAAGGCGTTGATCCCAAATCAACCGCCATTCCAATGGCTGAATATCGCAAAGTGATCAAAG
CCCGAATGGATATGTTGGAAATGGCTCCTGACTTTGCCCGCCGCTATTTGAACGAAGGTTTCTCAGGCGGTGAAAAGAAA
CGCCTCGAAATTTTGCAAATGGCCATGTTGCAGCCAGCTATGGCAATCATGGACGAAACCGACTCAGGCCTTGATATCGA
CGCTTTGAAGATTGTGGCCGAAGGTGTCAACAAAGTTAAAGCTGAAAAACCTGAATTAGGCGTGTTGGTGATTACCCACT
ACCAACGCTTGCTCAACTACATCAAGCCCGATTATGTGCACGTTTTGATGAACGGCCAAATTGTGCGCGAAGGCGGCCCC
GACATGGCCTTAGAACTCGAAGAAAAAGGTTACGATTTCATTCGAGAGGAAGTGTTCGGCAATGCCAGCTAA

Upstream 100 bases:

>100_bases
GAGATTGGGATCGAGAAGCATAACTAAGTTCTTTGGCGGCTGGCGATGCAGGGGGCATGCCATGCTGTTGTGTTGAATAG
CAATCTTGAATAGGAGTGTC

Downstream 100 bases:

>100_bases
TTTGCAATCTACCTTTGATCTGGCGCAATTTGAGGCTTTGTTGGCCAGTCGCAACGAGCCAAGCTGGCTGACCAGCCGCC
GTCGCGAAGCTTGGGAAGCA

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSANNLVIRNLHVAVDGKEILKGINLTIEEGKIHAIMGPNGSGKSTLAYTLAGHPRYEVTEGEVWYKGQDVLDLEPNDRS
KLGLFLAFQYPVAVAGVTVANFLRAALNAHRAQEGVDPKSTAIPMAEYRKVIKARMDMLEMAPDFARRYLNEGFSGGEKK
RLEILQMAMLQPAMAIMDETDSGLDIDALKIVAEGVNKVKAEKPELGVLVITHYQRLLNYIKPDYVHVLMNGQIVREGGP
DMALELEEKGYDFIREEVFGNAS

Sequences:

>Translated_263_residues
MSANNLVIRNLHVAVDGKEILKGINLTIEEGKIHAIMGPNGSGKSTLAYTLAGHPRYEVTEGEVWYKGQDVLDLEPNDRS
KLGLFLAFQYPVAVAGVTVANFLRAALNAHRAQEGVDPKSTAIPMAEYRKVIKARMDMLEMAPDFARRYLNEGFSGGEKK
RLEILQMAMLQPAMAIMDETDSGLDIDALKIVAEGVNKVKAEKPELGVLVITHYQRLLNYIKPDYVHVLMNGQIVREGGP
DMALELEEKGYDFIREEVFGNAS
>Mature_262_residues
SANNLVIRNLHVAVDGKEILKGINLTIEEGKIHAIMGPNGSGKSTLAYTLAGHPRYEVTEGEVWYKGQDVLDLEPNDRSK
LGLFLAFQYPVAVAGVTVANFLRAALNAHRAQEGVDPKSTAIPMAEYRKVIKARMDMLEMAPDFARRYLNEGFSGGEKKR
LEILQMAMLQPAMAIMDETDSGLDIDALKIVAEGVNKVKAEKPELGVLVITHYQRLLNYIKPDYVHVLMNGQIVREGGPD
MALELEEKGYDFIREEVFGNAS

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=228, Percent_Identity=28.5087719298246, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI255708477, Length=228, Percent_Identity=28.5087719298246, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI42741659, Length=258, Percent_Identity=29.0697674418605, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787972, Length=252, Percent_Identity=50.7936507936508, Blast_Score=261, Evalue=4e-71,
Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=24.7933884297521, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787500, Length=227, Percent_Identity=29.5154185022026, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=29.4871794871795, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=26.431718061674, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=25.6521739130435, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789962, Length=229, Percent_Identity=28.3842794759825, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=241, Percent_Identity=26.5560165975104, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI87082267, Length=171, Percent_Identity=29.2397660818713, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081791, Length=180, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786654, Length=248, Percent_Identity=25.8064516129032, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI48994997, Length=257, Percent_Identity=26.0700389105058, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=224, Percent_Identity=27.6785714285714, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71996809, Length=225, Percent_Identity=28.4444444444444, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=225, Percent_Identity=28, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=225, Percent_Identity=28, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=224, Percent_Identity=27.6785714285714, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=240, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=234, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323217, Length=221, Percent_Identity=28.9592760180996, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=234, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281363262, Length=234, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161076682, Length=230, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI161076684, Length=230, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581617, Length=230, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581615, Length=230, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29116; Mature: 28985

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANNLVIRNLHVAVDGKEILKGINLTIEEGKIHAIMGPNGSGKSTLAYTLAGHPRYEVT
CCCCCEEEEEEEEEECHHHHHCCCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCEEEC
EGEVWYKGQDVLDLEPNDRSKLGLFLAFQYPVAVAGVTVANFLRAALNAHRAQEGVDPKS
CCEEEECCCEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TAIPMAEYRKVIKARMDMLEMAPDFARRYLNEGFSGGEKKRLEILQMAMLQPAMAIMDET
HCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DSGLDIDALKIVAEGVNKVKAEKPELGVLVITHYQRLLNYIKPDYVHVLMNGQIVREGGP
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCEEEEEECCEEEECCCC
DMALELEEKGYDFIREEVFGNAS
CCEEEEHHCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SANNLVIRNLHVAVDGKEILKGINLTIEEGKIHAIMGPNGSGKSTLAYTLAGHPRYEVT
CCCCEEEEEEEEEECHHHHHCCCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCEEEC
EGEVWYKGQDVLDLEPNDRSKLGLFLAFQYPVAVAGVTVANFLRAALNAHRAQEGVDPKS
CCEEEECCCEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TAIPMAEYRKVIKARMDMLEMAPDFARRYLNEGFSGGEKKRLEILQMAMLQPAMAIMDET
HCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DSGLDIDALKIVAEGVNKVKAEKPELGVLVITHYQRLLNYIKPDYVHVLMNGQIVREGGP
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCEEEEEECCEEEECCCC
DMALELEEKGYDFIREEVFGNAS
CCEEEEHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]