| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896914
Identifier: 159896914
GI number: 159896914
Start: 453688
End: 454326
Strand: Reverse
Name: 159896914
Synonym: Haur_0382
Alternate gene names: NA
Gene position: 454326-453688 (Counterclockwise)
Preceding gene: 159896915
Following gene: 159896909
Centisome position: 7.16
GC content: 53.52
Gene sequence:
>639_bases ATGCCTGAGGCCAACACACCTGTTTTAGTCGCCGTTTTGAATAACCACGCCGATTGGCAGCGAATTCAACACGAGCACTG GTATCGTGTTCCGCTGGCTCATGCTCCGCGCCGGATGGCTGCTGGCATGTTGGCATGGTATCAAACCAAAGCCTTTGGCG ACGAAGGCGGTCAAATTCGCTGGTATGCGCCAATTGAGCATGTCAGCCAAGCCACGCGCAGCCAACTCATCCCTGAGCAA CCTGAGCATCCGCGTGCCCACGAACGTTATTGGCGGCTCGAAGTTGGAGCCTTGCAAGCATTGCCCCAGCCAATTATGGC CCAGCGCTTTCGGCGCATTACCTTCATCAGCACCAACTGGCAACAGCTGATTCATGCCAAACAGATCAACGATCTCTGGC TCGGTGATAGCTTGCTTGAACAACTGAGCCAACAATTAATCAGCGAGGGCATGAACGTGGTGCGGCGGCGCTTACACGAT GGTAACACGCCGCCACAGGGCACATTTGTACTTATCCCACTGCTCAATCAGATAGAGGTAAGCATTGGCGAACAGCGCTT ACGCCTCGATCACGACGATTTAATTTGGGATTTTGCAGGTTGTCTGACGAATATTCGGGCGTTGCAACAGCGCAATTGA
Upstream 100 bases:
>100_bases TGATCTGATGCTTGAGGTTAAAGCTGGAGATTTGGCAATTGAACGGGCACGCAACGATTTGCAACGCTTTGCACCTGAGA TTTCTGATGTGGAGTAACAT
Downstream 100 bases:
>100_bases GGAAAGCCCAACCAACCTTATTGACCAGCCAGTAGCAAACGGGCTAAGCGCTCACCACCGACTAAATCGGCCAAGTGCGA CAATTGATTATCTTCGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPEANTPVLVAVLNNHADWQRIQHEHWYRVPLAHAPRRMAAGMLAWYQTKAFGDEGGQIRWYAPIEHVSQATRSQLIPEQ PEHPRAHERYWRLEVGALQALPQPIMAQRFRRITFISTNWQQLIHAKQINDLWLGDSLLEQLSQQLISEGMNVVRRRLHD GNTPPQGTFVLIPLLNQIEVSIGEQRLRLDHDDLIWDFAGCLTNIRALQQRN
Sequences:
>Translated_212_residues MPEANTPVLVAVLNNHADWQRIQHEHWYRVPLAHAPRRMAAGMLAWYQTKAFGDEGGQIRWYAPIEHVSQATRSQLIPEQ PEHPRAHERYWRLEVGALQALPQPIMAQRFRRITFISTNWQQLIHAKQINDLWLGDSLLEQLSQQLISEGMNVVRRRLHD GNTPPQGTFVLIPLLNQIEVSIGEQRLRLDHDDLIWDFAGCLTNIRALQQRN >Mature_211_residues PEANTPVLVAVLNNHADWQRIQHEHWYRVPLAHAPRRMAAGMLAWYQTKAFGDEGGQIRWYAPIEHVSQATRSQLIPEQP EHPRAHERYWRLEVGALQALPQPIMAQRFRRITFISTNWQQLIHAKQINDLWLGDSLLEQLSQQLISEGMNVVRRRLHDG NTPPQGTFVLIPLLNQIEVSIGEQRLRLDHDDLIWDFAGCLTNIRALQQRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24661; Mature: 24529
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEANTPVLVAVLNNHADWQRIQHEHWYRVPLAHAPRRMAAGMLAWYQTKAFGDEGGQIR CCCCCCCEEEEEECCCHHHHHHHHHCEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCEEE WYAPIEHVSQATRSQLIPEQPEHPRAHERYWRLEVGALQALPQPIMAQRFRRITFISTNW EECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCH QQLIHAKQINDLWLGDSLLEQLSQQLISEGMNVVRRRLHDGNTPPQGTFVLIPLLNQIEV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHH SIGEQRLRLDHDDLIWDFAGCLTNIRALQQRN HHCHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEANTPVLVAVLNNHADWQRIQHEHWYRVPLAHAPRRMAAGMLAWYQTKAFGDEGGQIR CCCCCCEEEEEECCCHHHHHHHHHCEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCEEE WYAPIEHVSQATRSQLIPEQPEHPRAHERYWRLEVGALQALPQPIMAQRFRRITFISTNW EECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCH QQLIHAKQINDLWLGDSLLEQLSQQLISEGMNVVRRRLHDGNTPPQGTFVLIPLLNQIEV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHH SIGEQRLRLDHDDLIWDFAGCLTNIRALQQRN HHCHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA