| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896880
Identifier: 159896880
GI number: 159896880
Start: 419578
End: 419964
Strand: Direct
Name: 159896880
Synonym: Haur_0348
Alternate gene names: NA
Gene position: 419578-419964 (Clockwise)
Preceding gene: 159896879
Following gene: 159896881
Centisome position: 6.61
GC content: 49.35
Gene sequence:
>387_bases ATGCGTCGTTGGTTTTTAGCTCTGTGTCTTTTGGTGGTGCTGGCGGGCTGCTCAGGCAGCAGTATCGCCACCCAAGTCTC GGATACAGTCCAACAATTAAGTGAAACCTCAGTGCAAGATTTGGTTGATCGTTTGTCGGGGATCGAAGAGGCGGTACGTA ACAACGATTGGGAGCAAACCCGTGCTTTATTTAGCACAGTTGAAAATGGCTGGAATGCGCTACGCGTGCCAGTTGAAGCC GCCTTTCCCGAGATTGCCAGCAATATTCAAGCTCAAATCGATCAACTGAGCCAAGCCTTGAGCGTTGAACTCCCAAGCTC TGAAGACGTTCGAGCAGGCTTATCCAATTTGCGCGATCAATTAGTGGCTTTATTGCAAGCACTTTAG
Upstream 100 bases:
>100_bases CTTCGTTCCCAAAACGAGGGGCTTTTTGGTTGTGGCACGCTGCTTGCCCTTTACACAGCGTTTAGAATACAAACGAAACT TAGCCTGAAGGAGTGTTGAA
Downstream 100 bases:
>100_bases AGCTACTTTTTGCTGTAAATTGTGGTATGCTTTTTGAGGTTTCCAACGTAGAGGAATGTGTGTGGGTGAATTTCAGCAGG CCTTGGAGTATGCGCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRRWFLALCLLVVLAGCSGSSIATQVSDTVQQLSETSVQDLVDRLSGIEEAVRNNDWEQTRALFSTVENGWNALRVPVEA AFPEIASNIQAQIDQLSQALSVELPSSEDVRAGLSNLRDQLVALLQAL
Sequences:
>Translated_128_residues MRRWFLALCLLVVLAGCSGSSIATQVSDTVQQLSETSVQDLVDRLSGIEEAVRNNDWEQTRALFSTVENGWNALRVPVEA AFPEIASNIQAQIDQLSQALSVELPSSEDVRAGLSNLRDQLVALLQAL >Mature_128_residues MRRWFLALCLLVVLAGCSGSSIATQVSDTVQQLSETSVQDLVDRLSGIEEAVRNNDWEQTRALFSTVENGWNALRVPVEA AFPEIASNIQAQIDQLSQALSVELPSSEDVRAGLSNLRDQLVALLQAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13968; Mature: 13968
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWFLALCLLVVLAGCSGSSIATQVSDTVQQLSETSVQDLVDRLSGIEEAVRNNDWEQT CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RALFSTVENGWNALRVPVEAAFPEIASNIQAQIDQLSQALSVELPSSEDVRAGLSNLRDQ HHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LVALLQAL HHHHHHHC >Mature Secondary Structure MRRWFLALCLLVVLAGCSGSSIATQVSDTVQQLSETSVQDLVDRLSGIEEAVRNNDWEQT CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RALFSTVENGWNALRVPVEAAFPEIASNIQAQIDQLSQALSVELPSSEDVRAGLSNLRDQ HHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LVALLQAL HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA