Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896866

Identifier: 159896866

GI number: 159896866

Start: 397853

End: 398560

Strand: Reverse

Name: 159896866

Synonym: Haur_0333

Alternate gene names: NA

Gene position: 398560-397853 (Counterclockwise)

Preceding gene: 159896867

Following gene: 159896864

Centisome position: 6.28

GC content: 45.76

Gene sequence:

>708_bases
ATGCGGTTGATTAGTTATTTTCTATTTATTTGTGGCTTAGTTGCCTGTGGTGGCGCAACGGCAACGCCAATTCCAGCAAC
ACAGGTGGTTGCTCAAGTAAGCACGGCAACCCCTGAGCCAACCTTGGTTCAGCCAACCCTTACACCCACGATTCCCCCGA
CGTTTACGCCACTCCCACGGGTAACCCCAACCGTAGCCGATTTGGGCAATATTCCAGGTAATAGCACAGCTTTTATCGAA
ATTAAAGGCTTGAAAACCTATACCAATCCCACCCAAGCCTTTTCAATCGACATACCTGACGATTGGCAAATGCGTGATAG
CGTTGATGCTGGCAATAATTTGCTCTTTTGGGTTGATCCCGCTGAGCAAGCGTTTATTCAATTGTTAGTGGTTGATGATA
GCCAGAATTTAATTGGCGACCAAGCTGAGTTTTTGAACGATTTTATTAGCCAAATTGTCGGGCAATCGTCGGAGTTTAAT
ATCGATCAGCCAGTGTTGCAAGCCGATGGCAACACCTATGTTTCGTATAGTTTTATTGATCAGCAAAGTTTGCTGGCGAT
GAGTGGCGATGGCTATGTGCGGCGTGATGGCAACTATCTTAGCATCATTCAGATTTTAGTGCCGTTGGAGCAATTTGAGG
CCTTGCAACCAGATCTTGTGCGGATTGTTCAGAGCTACAAGATTGATCCTAATCTGCCATTGCAATAA

Upstream 100 bases:

>100_bases
CAACAATGGGCGCTTTGGCAGCGCGGCGAATTTGCCTAAGCTAAAATCGAGTACACTCTAGACCGTCATTGAGCCGACCG
ATTTGGTCGAAGGAGCATCT

Downstream 100 bases:

>100_bases
TTAACAAAACAGGGATGGCCGCAACCATCCCTGCTTTGGCAACAACTCTAGAAATCGCAACCCATGCGGGTCATTGGCAA
ATAGACATTGAAATCACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRLISYFLFICGLVACGGATATPIPATQVVAQVSTATPEPTLVQPTLTPTIPPTFTPLPRVTPTVADLGNIPGNSTAFIE
IKGLKTYTNPTQAFSIDIPDDWQMRDSVDAGNNLLFWVDPAEQAFIQLLVVDDSQNLIGDQAEFLNDFISQIVGQSSEFN
IDQPVLQADGNTYVSYSFIDQQSLLAMSGDGYVRRDGNYLSIIQILVPLEQFEALQPDLVRIVQSYKIDPNLPLQ

Sequences:

>Translated_235_residues
MRLISYFLFICGLVACGGATATPIPATQVVAQVSTATPEPTLVQPTLTPTIPPTFTPLPRVTPTVADLGNIPGNSTAFIE
IKGLKTYTNPTQAFSIDIPDDWQMRDSVDAGNNLLFWVDPAEQAFIQLLVVDDSQNLIGDQAEFLNDFISQIVGQSSEFN
IDQPVLQADGNTYVSYSFIDQQSLLAMSGDGYVRRDGNYLSIIQILVPLEQFEALQPDLVRIVQSYKIDPNLPLQ
>Mature_235_residues
MRLISYFLFICGLVACGGATATPIPATQVVAQVSTATPEPTLVQPTLTPTIPPTFTPLPRVTPTVADLGNIPGNSTAFIE
IKGLKTYTNPTQAFSIDIPDDWQMRDSVDAGNNLLFWVDPAEQAFIQLLVVDDSQNLIGDQAEFLNDFISQIVGQSSEFN
IDQPVLQADGNTYVSYSFIDQQSLLAMSGDGYVRRDGNYLSIIQILVPLEQFEALQPDLVRIVQSYKIDPNLPLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25724; Mature: 25724

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLISYFLFICGLVACGGATATPIPATQVVAQVSTATPEPTLVQPTLTPTIPPTFTPLPR
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
VTPTVADLGNIPGNSTAFIEIKGLKTYTNPTQAFSIDIPDDWQMRDSVDAGNNLLFWVDP
CCCCHHHHCCCCCCCEEEEEEECCEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECC
AEQAFIQLLVVDDSQNLIGDQAEFLNDFISQIVGQSSEFNIDQPVLQADGNTYVSYSFID
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEEEC
QQSLLAMSGDGYVRRDGNYLSIIQILVPLEQFEALQPDLVRIVQSYKIDPNLPLQ
CCEEEEECCCCEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLISYFLFICGLVACGGATATPIPATQVVAQVSTATPEPTLVQPTLTPTIPPTFTPLPR
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCC
VTPTVADLGNIPGNSTAFIEIKGLKTYTNPTQAFSIDIPDDWQMRDSVDAGNNLLFWVDP
CCCCHHHHCCCCCCCEEEEEEECCEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECC
AEQAFIQLLVVDDSQNLIGDQAEFLNDFISQIVGQSSEFNIDQPVLQADGNTYVSYSFID
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEEEC
QQSLLAMSGDGYVRRDGNYLSIIQILVPLEQFEALQPDLVRIVQSYKIDPNLPLQ
CCEEEEECCCCEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA