| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896850
Identifier: 159896850
GI number: 159896850
Start: 378701
End: 379465
Strand: Direct
Name: 159896850
Synonym: Haur_0317
Alternate gene names: NA
Gene position: 378701-379465 (Clockwise)
Preceding gene: 159896846
Following gene: 159896851
Centisome position: 5.97
GC content: 50.33
Gene sequence:
>765_bases ATGAGCGCAGTAGTTGAGTTAAGCCGCGCCGAAATTGTGACAATTTGTGCTGTGGTTAGTGCAGCAAGTATTATGGGGGT TGCTCCAGCCCAAAATCCTGCTGAGCACGCTCAATTATTACAGCTTGGCGAAGCCGCACTGCGCCAACGCCAGCTTGCTC AATCCGACCAAGATGGAATGTTGATGATCGCCCGTGATCCGCTGGCCTTGGTCGCAACCTGTGCTTACCCCCAGCGCAGT TTGATCATCCATCATGTGCAACATAATGGGTCGGTGCTGCAAGCATTTGGGCATAAACACGCCGATTCAGTGGTTTTCCA CGAGGTGCTCAATTCCGATATGCAGCGTTTGCAGGCCTTTGGTTCGTTGGCACAACTAGCAAATTACAGCCTTGATTGGT GTGGCTACGCGGGAAGTGCTGAGTTAAGTGTGCGCTGGCATATTCAAAGCACGGTTTTGGCCGAAGCCCGTAGTTTGGTT GAACAAAGCGAGGAACAAGCTGCCCTACGAGCCTTGGGCAATTCGGGTGTTTCGGCTGAAGCAGCCATCCGTTTGATCGA GTTGTTGAGCCAACCACATACCACCACGATTTTCAATGCAGTGGTCTATCAAGGTCAGCAGGTGTTGAGCCGTGAATATA GTTTATTGCAGGCAGGCCAACACACCTTACTCATGACCCAAACTAACATTGAGCAAGATCTCTATCAACTTGAAACGACC AGTCGCGAACGCTTGGCCAATTTGTTGATTCAATCGTTAGCATAG
Upstream 100 bases:
>100_bases CCTTGTGCTAGTTGGGTTGCAATGCTCAGCGCATTTTAGCATGGCCTCGCCCAGTTTGCCGTTACAATGGAGTGAGCTTT GTTGATGTTTGGAGGTTGGT
Downstream 100 bases:
>100_bases TTTAGAAGGGCTTGGCGTGAATTCGCAGCAATCAAATCAGCTTATCCAAGGCGAAATGCTCGATGTTATCGGCTCAATCG CGCCTCAATCGATCAATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSAVVELSRAEIVTICAVVSAASIMGVAPAQNPAEHAQLLQLGEAALRQRQLAQSDQDGMLMIARDPLALVATCAYPQRS LIIHHVQHNGSVLQAFGHKHADSVVFHEVLNSDMQRLQAFGSLAQLANYSLDWCGYAGSAELSVRWHIQSTVLAEARSLV EQSEEQAALRALGNSGVSAEAAIRLIELLSQPHTTTIFNAVVYQGQQVLSREYSLLQAGQHTLLMTQTNIEQDLYQLETT SRERLANLLIQSLA
Sequences:
>Translated_254_residues MSAVVELSRAEIVTICAVVSAASIMGVAPAQNPAEHAQLLQLGEAALRQRQLAQSDQDGMLMIARDPLALVATCAYPQRS LIIHHVQHNGSVLQAFGHKHADSVVFHEVLNSDMQRLQAFGSLAQLANYSLDWCGYAGSAELSVRWHIQSTVLAEARSLV EQSEEQAALRALGNSGVSAEAAIRLIELLSQPHTTTIFNAVVYQGQQVLSREYSLLQAGQHTLLMTQTNIEQDLYQLETT SRERLANLLIQSLA >Mature_253_residues SAVVELSRAEIVTICAVVSAASIMGVAPAQNPAEHAQLLQLGEAALRQRQLAQSDQDGMLMIARDPLALVATCAYPQRSL IIHHVQHNGSVLQAFGHKHADSVVFHEVLNSDMQRLQAFGSLAQLANYSLDWCGYAGSAELSVRWHIQSTVLAEARSLVE QSEEQAALRALGNSGVSAEAAIRLIELLSQPHTTTIFNAVVYQGQQVLSREYSLLQAGQHTLLMTQTNIEQDLYQLETTS RERLANLLIQSLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27676; Mature: 27545
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVELSRAEIVTICAVVSAASIMGVAPAQNPAEHAQLLQLGEAALRQRQLAQSDQDGM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE LMIARDPLALVATCAYPQRSLIIHHVQHNGSVLQAFGHKHADSVVFHEVLNSDMQRLQAF EEEECCCHHHHHHHCCCCHHHEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GSLAQLANYSLDWCGYAGSAELSVRWHIQSTVLAEARSLVEQSEEQAALRALGNSGVSAE HHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAIRLIELLSQPHTTTIFNAVVYQGQQVLSREYSLLQAGQHTLLMTQTNIEQDLYQLETT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCC SRERLANLLIQSLA HHHHHHHHHHHHCC >Mature Secondary Structure SAVVELSRAEIVTICAVVSAASIMGVAPAQNPAEHAQLLQLGEAALRQRQLAQSDQDGM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE LMIARDPLALVATCAYPQRSLIIHHVQHNGSVLQAFGHKHADSVVFHEVLNSDMQRLQAF EEEECCCHHHHHHHCCCCHHHEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GSLAQLANYSLDWCGYAGSAELSVRWHIQSTVLAEARSLVEQSEEQAALRALGNSGVSAE HHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AAIRLIELLSQPHTTTIFNAVVYQGQQVLSREYSLLQAGQHTLLMTQTNIEQDLYQLETT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCC SRERLANLLIQSLA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA