Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896795

Identifier: 159896795

GI number: 159896795

Start: 307616

End: 308188

Strand: Reverse

Name: 159896795

Synonym: Haur_0262

Alternate gene names: NA

Gene position: 308188-307616 (Counterclockwise)

Preceding gene: 159896797

Following gene: 159896793

Centisome position: 4.86

GC content: 57.42

Gene sequence:

>573_bases
ATGGCTGATACAAGCGATGAAAAAAAGGCGCGGCTCGATGCGATTCGCGCAGCCAATGCCGCCAAAAAGGCTGCTGCGGG
CGAAGAGCCTGCACCTGCACCTGCTGCGCCGGTCGTAGCGGCAACAACCGAGGCTCCAGCCAGCGCTGCGGTTGGCGCTA
ATATGTCGGATGATAAAAAGGCTCGGTTGGAAGCAATTCGGGCTGCCAAAAAAGCTGCTGCAAGCGATGCACCTGTTGCC
CCAGTCGCTGTTGCTGCAACCCCAACTCCTGCTGCTGCACCTGTGGTTGCCGCCACGCCTGCTGCTGCTCCGGCTGCACC
TGTTGCCCCAAAACCAGCTGCTCCCGCCAGCAATGGCAACGATTTGATCACCGCAAATTCGATTATTTCGCTGACTATGC
TTGGTCGGCTCAAGCGAATTGTTGCGGGGGTTGCCTTCTGTGTGTTGATCGGCTTGGGTTTGGCCACGGTCACTGGCGAA
TATTTGCTCGGTGGTGGCTTCGGTGCATTAATTGGAGTTGTTGGCGGGTTGATGGTTGGCGATTGGCCAGCAGTCAAAAC
CACTGGCGACTAA

Upstream 100 bases:

>100_bases
AACTCATTGAGTTGAGGATTACTGGCTTGTTTGCGATTGGGAATACCGTGCTATCGGAATAATGTCGATCAATTTAATCT
TTGCTATCTGAGGGACGCAC

Downstream 100 bases:

>100_bases
ACTGCATTTTTGCTCATAAACATCCCCTGCAACACTTAATTAAAGTTGCAGGGGATGTTTTGGTTTAGCGTAGGACGGTT
TCTTGCCATTCGTTGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MADTSDEKKARLDAIRAANAAKKAAAGEEPAPAPAAPVVAATTEAPASAAVGANMSDDKKARLEAIRAAKKAAASDAPVA
PVAVAATPTPAAAPVVAATPAAAPAAPVAPKPAAPASNGNDLITANSIISLTMLGRLKRIVAGVAFCVLIGLGLATVTGE
YLLGGGFGALIGVVGGLMVGDWPAVKTTGD

Sequences:

>Translated_190_residues
MADTSDEKKARLDAIRAANAAKKAAAGEEPAPAPAAPVVAATTEAPASAAVGANMSDDKKARLEAIRAAKKAAASDAPVA
PVAVAATPTPAAAPVVAATPAAAPAAPVAPKPAAPASNGNDLITANSIISLTMLGRLKRIVAGVAFCVLIGLGLATVTGE
YLLGGGFGALIGVVGGLMVGDWPAVKTTGD
>Mature_189_residues
ADTSDEKKARLDAIRAANAAKKAAAGEEPAPAPAAPVVAATTEAPASAAVGANMSDDKKARLEAIRAAKKAAASDAPVAP
VAVAATPTPAAAPVVAATPAAAPAAPVAPKPAAPASNGNDLITANSIISLTMLGRLKRIVAGVAFCVLIGLGLATVTGEY
LLGGGFGALIGVVGGLMVGDWPAVKTTGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18290; Mature: 18159

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTSDEKKARLDAIRAANAAKKAAAGEEPAPAPAAPVVAATTEAPASAAVGANMSDDKK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCHHH
ARLEAIRAAKKAAASDAPVAPVAVAATPTPAAAPVVAATPAAAPAAPVAPKPAAPASNGN
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
DLITANSIISLTMLGRLKRIVAGVAFCVLIGLGLATVTGEYLLGGGFGALIGVVGGLMVG
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCC
DWPAVKTTGD
CCCCCCCCCC
>Mature Secondary Structure 
ADTSDEKKARLDAIRAANAAKKAAAGEEPAPAPAAPVVAATTEAPASAAVGANMSDDKK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCHHH
ARLEAIRAAKKAAASDAPVAPVAVAATPTPAAAPVVAATPAAAPAAPVAPKPAAPASNGN
HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
DLITANSIISLTMLGRLKRIVAGVAFCVLIGLGLATVTGEYLLGGGFGALIGVVGGLMVG
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCC
DWPAVKTTGD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA