Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896772

Identifier: 159896772

GI number: 159896772

Start: 274674

End: 275054

Strand: Direct

Name: 159896772

Synonym: Haur_0239

Alternate gene names: NA

Gene position: 274674-275054 (Clockwise)

Preceding gene: 159896771

Following gene: 159896781

Centisome position: 4.33

GC content: 50.13

Gene sequence:

>381_bases
ATGCAACCCCAAGCACCGCAACCACTTCAACCACCACCAGTTCAAATCGTACCACCATGGATGATCTCAGCCACCTTCGA
TTTGCCAGGCTTCCGAGTTGTGCAAAATCGTGGGATTGTACGGGGCATTGTGGTACGTTCGCGCTCGGTTTTTGGCACAA
TTGGCGCATCATTTCAAACCCTGGTTGGCGGCAATATTACCATTTGGTCGAAGCTATGTGAGCAAACTCGCATGGAAGCC
TTCGAAATTATGTCGTTGCATGCCGCCGAAATTGGGGCAAACGCGATTATTGCGATGCGCTACGATGCCACCGAAATTAG
CACTGGCGTGACTGAAGTGCTGGCCTATGGTAGTGCCGTAATTGTTGAACCAATTCGTTAA

Upstream 100 bases:

>100_bases
CAACTGGCTACGGCACACAGCATCAACACGATTTGCCTGAGCATGCTATGCTGGTCGCAAATCTTAATGCTGCTGTCGAT
TTGATTGTGCAGGAGTAAGT

Downstream 100 bases:

>100_bases
GCCAAAATCAGCCAAGCTATTGCTCATGCTAGCTTGGCTTTTTTGTAAATAATTGCTTAAGCGTATTCCAAAGCAGCTCG
GCTCCCACAAAGATGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQPQAPQPLQPPPVQIVPPWMISATFDLPGFRVVQNRGIVRGIVVRSRSVFGTIGASFQTLVGGNITIWSKLCEQTRMEA
FEIMSLHAAEIGANAIIAMRYDATEISTGVTEVLAYGSAVIVEPIR

Sequences:

>Translated_126_residues
MQPQAPQPLQPPPVQIVPPWMISATFDLPGFRVVQNRGIVRGIVVRSRSVFGTIGASFQTLVGGNITIWSKLCEQTRMEA
FEIMSLHAAEIGANAIIAMRYDATEISTGVTEVLAYGSAVIVEPIR
>Mature_126_residues
MQPQAPQPLQPPPVQIVPPWMISATFDLPGFRVVQNRGIVRGIVVRSRSVFGTIGASFQTLVGGNITIWSKLCEQTRMEA
FEIMSLHAAEIGANAIIAMRYDATEISTGVTEVLAYGSAVIVEPIR

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002765 [H]

Pfam domain/function: PF01906 DUF74 [H]

EC number: NA

Molecular weight: Translated: 13680; Mature: 13680

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPQAPQPLQPPPVQIVPPWMISATFDLPGFRVVQNRGIVRGIVVRSRSVFGTIGASFQT
CCCCCCCCCCCCCCEEECCEEEEEEECCCCEEEECCCCCEEEEEEECCCEEEECCCCEEE
LVGGNITIWSKLCEQTRMEAFEIMSLHAAEIGANAIIAMRYDATEISTGVTEVLAYGSAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEE
IVEPIR
EEEECC
>Mature Secondary Structure
MQPQAPQPLQPPPVQIVPPWMISATFDLPGFRVVQNRGIVRGIVVRSRSVFGTIGASFQT
CCCCCCCCCCCCCCEEECCEEEEEEECCCCEEEECCCCCEEEEEEECCCEEEECCCCEEE
LVGGNITIWSKLCEQTRMEAFEIMSLHAAEIGANAIIAMRYDATEISTGVTEVLAYGSAV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEE
IVEPIR
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA