| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is gmhB [H]
Identifier: 159896771
GI number: 159896771
Start: 274132
End: 274671
Strand: Direct
Name: gmhB [H]
Synonym: Haur_0238
Alternate gene names: 159896771
Gene position: 274132-274671 (Clockwise)
Preceding gene: 159896770
Following gene: 159896772
Centisome position: 4.32
GC content: 47.22
Gene sequence:
>540_bases ATGAGCCAACCAGCCGTGTTTATTGATCGTGATGGTACGATCAATGTTGAAGTTAATTATCTGCATCAGCCCGAATTGGT TCAGCTTGAGCAAACTGTTGGTCAAGCGATCGCTCGTTTGAATCAAGCTGGATTTTTGGTGTTGGTCGTGACCAATCAAT CAGGAATTGCTCGTGGCTATTATCGCGCTGAGGATATGCATTTGGTCCATCAGCGGATTAGTGAATTGTTACAGCCCTTT AATGCCCATATTGATGCTTGGTATTATTGCCCGCATCATCCTGAGGTAACGGGCGATTGTGCTTGTCGCAAACCCAATTT GGGTATGTTCGAGCAAGCTCAAGCCGAATTCGCGATCGATCTCAGTCGTTCGTGGATGATTGGCGATAAGCTGCTCGATG TGCAAGCAGGCATCAATTTGGGCGTACCCGCAATTATGGTGGCAACTGGCTACGGCACACAGCATCAACACGATTTGCCT GAGCATGCTATGCTGGTCGCAAATCTTAATGCTGCTGTCGATTTGATTGTGCAGGAGTAA
Upstream 100 bases:
>100_bases AAGCTTTATTTGCCAAATAACGAGCTTGATCGACGCAATGGCGCAGAGATTGTGATGATCTCTGCGTTTTTTAATTAAAT TTTATAGTTGAGATAGACCA
Downstream 100 bases:
>100_bases GTATGCAACCCCAAGCACCGCAACCACTTCAACCACCACCAGTTCAAATCGTACCACCATGGATGATCTCAGCCACCTTC GATTTGCCAGGCTTCCGAGT
Product: histidinol-phosphate phosphatase family protein
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSQPAVFIDRDGTINVEVNYLHQPELVQLEQTVGQAIARLNQAGFLVLVVTNQSGIARGYYRAEDMHLVHQRISELLQPF NAHIDAWYYCPHHPEVTGDCACRKPNLGMFEQAQAEFAIDLSRSWMIGDKLLDVQAGINLGVPAIMVATGYGTQHQHDLP EHAMLVANLNAAVDLIVQE
Sequences:
>Translated_179_residues MSQPAVFIDRDGTINVEVNYLHQPELVQLEQTVGQAIARLNQAGFLVLVVTNQSGIARGYYRAEDMHLVHQRISELLQPF NAHIDAWYYCPHHPEVTGDCACRKPNLGMFEQAQAEFAIDLSRSWMIGDKLLDVQAGINLGVPAIMVATGYGTQHQHDLP EHAMLVANLNAAVDLIVQE >Mature_178_residues SQPAVFIDRDGTINVEVNYLHQPELVQLEQTVGQAIARLNQAGFLVLVVTNQSGIARGYYRAEDMHLVHQRISELLQPFN AHIDAWYYCPHHPEVTGDCACRKPNLGMFEQAQAEFAIDLSRSWMIGDKLLDVQAGINLGVPAIMVATGYGTQHQHDLPE HAMLVANLNAAVDLIVQE
Specific function: Converts the D-glycero-alpha-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-alpha-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=156, Percent_Identity=40.3846153846154, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI87082027, Length=148, Percent_Identity=31.0810810810811, Blast_Score=81, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 19899; Mature: 19768
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPAVFIDRDGTINVEVNYLHQPELVQLEQTVGQAIARLNQAGFLVLVVTNQSGIARGY CCCCCEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCE YRAEDMHLVHQRISELLQPFNAHIDAWYYCPHHPEVTGDCACRKPNLGMFEQAQAEFAID ECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEEE LSRSWMIGDKLLDVQAGINLGVPAIMVATGYGTQHQHDLPEHAMLVANLNAAVDLIVQE CCCCEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEC >Mature Secondary Structure SQPAVFIDRDGTINVEVNYLHQPELVQLEQTVGQAIARLNQAGFLVLVVTNQSGIARGY CCCCEEEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCE YRAEDMHLVHQRISELLQPFNAHIDAWYYCPHHPEVTGDCACRKPNLGMFEQAQAEFAID ECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEEE LSRSWMIGDKLLDVQAGINLGVPAIMVATGYGTQHQHDLPEHAMLVANLNAAVDLIVQE CCCCEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286; 12101286 [H]