Click here to switch to the map view.

The map label for this gene is rrmA [C]

Identifier: 159896758

GI number: 159896758

Start: 261373

End: 262041

Strand: Reverse

Name: rrmA [C]

Synonym: Haur_0225

Alternate gene names: 159896758

Gene position: 262041-261373 (Counterclockwise)

Preceding gene: 159896759

Following gene: 159896757

Centisome position: 4.13

GC content: 52.32

Gene sequence:

>669_bases
ATGCTGCAACGAATGCAAGCGTTGGTCATTTGGGCCTTTGAGCGCTTTTATCATGAAGCTGCCTTTACCTATGATTTGGT
CGCGTGGCTGATGTCGCAGGGCTATTGGAGCCAATGGGTGCTGGCAGCATTGCCTGACGTTGCTGATCAGCACTTGCTGG
AGCTTGGCTGTGGCACGGGCTATGTCCAACAAGCTCGCCAAGATCAACCAAGCCTTACAATTGGCCTTGATGAATCACGC
CAAATGTTGGGTTTGAGCCGCCGCCGAGCGCCCCAAGCCACGCTGGTTCGGGCAGTTGCCCAAGCCTTGCCCTATGCTGA
TGCCAGTTGGTCGGCGGTGCTTTCGACCTTTCCAGCGCCTTATTTATTTGATCGACGTACCTTGGCCGAATTGCAACGGG
TACTGACCAGCGATGGCAAATTGTATATTGTCGATGGCGGCAGTATTCCCAATAGCCTGTATGCCATGATCATCGGGTTA
ATCTATCGGCTAGTGTTTGGGCGACACAGCAACCCTGAAGCGCCAACCAGCCAACTTGACCCACGCATCCAGCGTTTGCA
AGAAGCAGGCTTTCGCGTCAACACTCACATCAAACAGGTTGGGCGCTCGCAAGTCCAAATCTTCATCGCCGAAAAAGCTA
ACCAATTAATTGATATTAGACTGGATTAG

Upstream 100 bases:

>100_bases
CAAAGAACGCCGCGGTTAATCGTTTTCGTTATAGCTGCAAAACCCTGCGCGGGTGTGGGCCAAGCCTGCACTCGCGTTTG
TATTTTTGGGAGCATTGGCG

Downstream 100 bases:

>100_bases
GGTCTGACTCAACCCAGCCCCCAATCCCCAGCCCCCAACAACCAACCTATGACAATTGGAATTCACGAAGAACAACAACT
TTGGCGCAACGGTGCGCGAA

Product: type 11 methyltransferase

Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]

Alternate protein names: Methyltransferase

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLQRMQALVIWAFERFYHEAAFTYDLVAWLMSQGYWSQWVLAALPDVADQHLLELGCGTGYVQQARQDQPSLTIGLDESR
QMLGLSRRRAPQATLVRAVAQALPYADASWSAVLSTFPAPYLFDRRTLAELQRVLTSDGKLYIVDGGSIPNSLYAMIIGL
IYRLVFGRHSNPEAPTSQLDPRIQRLQEAGFRVNTHIKQVGRSQVQIFIAEKANQLIDIRLD

Sequences:

>Translated_222_residues
MLQRMQALVIWAFERFYHEAAFTYDLVAWLMSQGYWSQWVLAALPDVADQHLLELGCGTGYVQQARQDQPSLTIGLDESR
QMLGLSRRRAPQATLVRAVAQALPYADASWSAVLSTFPAPYLFDRRTLAELQRVLTSDGKLYIVDGGSIPNSLYAMIIGL
IYRLVFGRHSNPEAPTSQLDPRIQRLQEAGFRVNTHIKQVGRSQVQIFIAEKANQLIDIRLD
>Mature_222_residues
MLQRMQALVIWAFERFYHEAAFTYDLVAWLMSQGYWSQWVLAALPDVADQHLLELGCGTGYVQQARQDQPSLTIGLDESR
QMLGLSRRRAPQATLVRAVAQALPYADASWSAVLSTFPAPYLFDRRTLAELQRVLTSDGKLYIVDGGSIPNSLYAMIIGL
IYRLVFGRHSNPEAPTSQLDPRIQRLQEAGFRVNTHIKQVGRSQVQIFIAEKANQLIDIRLD

Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.51 [C]

Molecular weight: Translated: 25107; Mature: 25107

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRMQALVIWAFERFYHEAAFTYDLVAWLMSQGYWSQWVLAALPDVADQHLLELGCGTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCH
YVQQARQDQPSLTIGLDESRQMLGLSRRRAPQATLVRAVAQALPYADASWSAVLSTFPAP
HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
YLFDRRTLAELQRVLTSDGKLYIVDGGSIPNSLYAMIIGLIYRLVFGRHSNPEAPTSQLD
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
PRIQRLQEAGFRVNTHIKQVGRSQVQIFIAEKANQLIDIRLD
HHHHHHHHCCCCHHHHHHHCCHHHHEEHEECCCCCEEEEEEC
>Mature Secondary Structure
MLQRMQALVIWAFERFYHEAAFTYDLVAWLMSQGYWSQWVLAALPDVADQHLLELGCGTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCH
YVQQARQDQPSLTIGLDESRQMLGLSRRRAPQATLVRAVAQALPYADASWSAVLSTFPAP
HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
YLFDRRTLAELQRVLTSDGKLYIVDGGSIPNSLYAMIIGLIYRLVFGRHSNPEAPTSQLD
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
PRIQRLQEAGFRVNTHIKQVGRSQVQIFIAEKANQLIDIRLD
HHHHHHHHCCCCHHHHHHHCCHHHHEEHEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Unidentified protein factor B [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-methionine; rRNA [C]

Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]

General reaction: Methyl group transfer [C]

Inhibitor: Mg2+; Unidentified protein factor A1 [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA