| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896736
Identifier: 159896736
GI number: 159896736
Start: 237823
End: 238557
Strand: Reverse
Name: 159896736
Synonym: Haur_0203
Alternate gene names: NA
Gene position: 238557-237823 (Counterclockwise)
Preceding gene: 159896737
Following gene: 159896735
Centisome position: 3.76
GC content: 50.88
Gene sequence:
>735_bases ATGTCGATGCAACGCTTACGTCAACTTACGGGCTGGGGCTTTATTCTTGGGGCAATTTTGGTCAACATTCCTTATGCGCT GCTGATCAGCAATTTCGATTATCCTGATATTTTGCGTGCGCCAGTTGAGCAAGTATTAACTCAATTTGCGGCTGGTGGGA GCGGTCTGATTTATACCTGGCTGGCATTTGCTTGGGTTGGCTTGCCCTTACTATTCGCCAGCATTATGCTCAAACGCTTG CCCGAATTTAGCGCCGTGCCGTTGATCGAAACCGCCAGCACGATTGGGGTGATTGGCTTTGTGGTGCAGGTGGTTGGGCT ATTGCGCTGGGTCTTTGTTGTGCCAATCATCGCCCAAGCCTATCTTGATCCGCTGACCTCGACCGAGACCAAAGCGAGCC TTGTAACGCTGTTTCAAGTTGTGCATCAATATGGCGGCGTAGTGTTGGGCGAGCACAGCGGCCAGCTCTTTATGATTATT TGGATGCTGCTGCTAAGTACAATCATCTATCGCTTGGAGCAATTTCCCAAGTGGCTGGCGTGGTTGGGCTGGTTGGCGGC GCTCATTTACAGCCTTGCCCAAACCGAGCTTTTAGCGACAGTTCTGCCCACGATTCCCGTGATCGATTGGGCCGGATTGG TGGGGAGTTTGCTGTGGCTAGGGTGGATGGCCAGCTTAGGAATTGTGATTTTACGCCAGAAAATACCCAACAACTCAATG CAAATTAATCCTTGA
Upstream 100 bases:
>100_bases TCGAAATCCAACAACAATCAATCGAACCAAGCACAATTAATAGTGGCGTGAGCTTGATGCTGCGCGTATTGCAACCCTAC ATCATTTAAAGGAGCGAGCC
Downstream 100 bases:
>100_bases CCAAAGCCTTCGAGTTATCTATAGTAAATCGTAACACTATCGTTAGAATGGTGATAGTGATGCAATGAGGTAGCCCTATG CATGCACGCGATTTTGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSMQRLRQLTGWGFILGAILVNIPYALLISNFDYPDILRAPVEQVLTQFAAGGSGLIYTWLAFAWVGLPLLFASIMLKRL PEFSAVPLIETASTIGVIGFVVQVVGLLRWVFVVPIIAQAYLDPLTSTETKASLVTLFQVVHQYGGVVLGEHSGQLFMII WMLLLSTIIYRLEQFPKWLAWLGWLAALIYSLAQTELLATVLPTIPVIDWAGLVGSLLWLGWMASLGIVILRQKIPNNSM QINP
Sequences:
>Translated_244_residues MSMQRLRQLTGWGFILGAILVNIPYALLISNFDYPDILRAPVEQVLTQFAAGGSGLIYTWLAFAWVGLPLLFASIMLKRL PEFSAVPLIETASTIGVIGFVVQVVGLLRWVFVVPIIAQAYLDPLTSTETKASLVTLFQVVHQYGGVVLGEHSGQLFMII WMLLLSTIIYRLEQFPKWLAWLGWLAALIYSLAQTELLATVLPTIPVIDWAGLVGSLLWLGWMASLGIVILRQKIPNNSM QINP >Mature_243_residues SMQRLRQLTGWGFILGAILVNIPYALLISNFDYPDILRAPVEQVLTQFAAGGSGLIYTWLAFAWVGLPLLFASIMLKRLP EFSAVPLIETASTIGVIGFVVQVVGLLRWVFVVPIIAQAYLDPLTSTETKASLVTLFQVVHQYGGVVLGEHSGQLFMIIW MLLLSTIIYRLEQFPKWLAWLGWLAALIYSLAQTELLATVLPTIPVIDWAGLVGSLLWLGWMASLGIVILRQKIPNNSMQ INP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27065; Mature: 26934
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMQRLRQLTGWGFILGAILVNIPYALLISNFDYPDILRAPVEQVLTQFAAGGSGLIYTW CCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH LAFAWVGLPLLFASIMLKRLPEFSAVPLIETASTIGVIGFVVQVVGLLRWVFVVPIIAQA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLDPLTSTETKASLVTLFQVVHQYGGVVLGEHSGQLFMIIWMLLLSTIIYRLEQFPKWLA HHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WLGWLAALIYSLAQTELLATVLPTIPVIDWAGLVGSLLWLGWMASLGIVILRQKIPNNSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QINP CCCC >Mature Secondary Structure SMQRLRQLTGWGFILGAILVNIPYALLISNFDYPDILRAPVEQVLTQFAAGGSGLIYTW CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH LAFAWVGLPLLFASIMLKRLPEFSAVPLIETASTIGVIGFVVQVVGLLRWVFVVPIIAQA HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLDPLTSTETKASLVTLFQVVHQYGGVVLGEHSGQLFMIIWMLLLSTIIYRLEQFPKWLA HHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WLGWLAALIYSLAQTELLATVLPTIPVIDWAGLVGSLLWLGWMASLGIVILRQKIPNNSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QINP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA