Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159896735

Identifier: 159896735

GI number: 159896735

Start: 237419

End: 237745

Strand: Reverse

Name: 159896735

Synonym: Haur_0202

Alternate gene names: NA

Gene position: 237745-237419 (Counterclockwise)

Preceding gene: 159896736

Following gene: 159896733

Centisome position: 3.75

GC content: 40.37

Gene sequence:

>327_bases
ATGCATGCACGCGATTTTGTTCAACCAGGCGAACAATTATTGGTATTGTTTACCCGTGGTCACTTATTAACCTTCAATAA
CGACGGAACTGGAACCAGTGGTAATTGGGACATGGCAGGAAACCGTAAAATCGATCGAGTCTTGATCTATTATCGTGATG
ATTCAAGCAATATTAATAAATTATATCTTGCCACCTATAAAGATGTCGAGAAAGTTGAGGATGGTCGCTATTGCGTTTAT
TTTGAACACTGTCAATACGTTGGCAAAACTGAACAAAACTGGGTCGAGTTTACTGGTGCACAACAGGCCGTTCGCTACTT
TGAATAG

Upstream 100 bases:

>100_bases
ACTCAATGCAAATTAATCCTTGACCAAAGCCTTCGAGTTATCTATAGTAAATCGTAACACTATCGTTAGAATGGTGATAG
TGATGCAATGAGGTAGCCCT

Downstream 100 bases:

>100_bases
CATTGTTGGCCCACTCCCAACCTCTGGCGGTTCACGTCAGGGGTTTTTGCATGAGTGATGCGATCTTTTCCTCTCGCATC
ACTCATGCACAATTTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINKLYLATYKDVEKVEDGRYCVY
FEHCQYVGKTEQNWVEFTGAQQAVRYFE

Sequences:

>Translated_108_residues
MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINKLYLATYKDVEKVEDGRYCVY
FEHCQYVGKTEQNWVEFTGAQQAVRYFE
>Mature_108_residues
MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINKLYLATYKDVEKVEDGRYCVY
FEHCQYVGKTEQNWVEFTGAQQAVRYFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12657; Mature: 12657

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINK
CCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCE
LYLATYKDVEKVEDGRYCVYFEHCQYVGKTEQNWVEFTGAQQAVRYFE
EEEEECCCHHHCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHHCC
>Mature Secondary Structure
MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINK
CCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCE
LYLATYKDVEKVEDGRYCVYFEHCQYVGKTEQNWVEFTGAQQAVRYFE
EEEEECCCHHHCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA