| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896735
Identifier: 159896735
GI number: 159896735
Start: 237419
End: 237745
Strand: Reverse
Name: 159896735
Synonym: Haur_0202
Alternate gene names: NA
Gene position: 237745-237419 (Counterclockwise)
Preceding gene: 159896736
Following gene: 159896733
Centisome position: 3.75
GC content: 40.37
Gene sequence:
>327_bases ATGCATGCACGCGATTTTGTTCAACCAGGCGAACAATTATTGGTATTGTTTACCCGTGGTCACTTATTAACCTTCAATAA CGACGGAACTGGAACCAGTGGTAATTGGGACATGGCAGGAAACCGTAAAATCGATCGAGTCTTGATCTATTATCGTGATG ATTCAAGCAATATTAATAAATTATATCTTGCCACCTATAAAGATGTCGAGAAAGTTGAGGATGGTCGCTATTGCGTTTAT TTTGAACACTGTCAATACGTTGGCAAAACTGAACAAAACTGGGTCGAGTTTACTGGTGCACAACAGGCCGTTCGCTACTT TGAATAG
Upstream 100 bases:
>100_bases ACTCAATGCAAATTAATCCTTGACCAAAGCCTTCGAGTTATCTATAGTAAATCGTAACACTATCGTTAGAATGGTGATAG TGATGCAATGAGGTAGCCCT
Downstream 100 bases:
>100_bases CATTGTTGGCCCACTCCCAACCTCTGGCGGTTCACGTCAGGGGTTTTTGCATGAGTGATGCGATCTTTTCCTCTCGCATC ACTCATGCACAATTTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINKLYLATYKDVEKVEDGRYCVY FEHCQYVGKTEQNWVEFTGAQQAVRYFE
Sequences:
>Translated_108_residues MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINKLYLATYKDVEKVEDGRYCVY FEHCQYVGKTEQNWVEFTGAQQAVRYFE >Mature_108_residues MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINKLYLATYKDVEKVEDGRYCVY FEHCQYVGKTEQNWVEFTGAQQAVRYFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12657; Mature: 12657
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINK CCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCE LYLATYKDVEKVEDGRYCVYFEHCQYVGKTEQNWVEFTGAQQAVRYFE EEEEECCCHHHCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHHCC >Mature Secondary Structure MHARDFVQPGEQLLVLFTRGHLLTFNNDGTGTSGNWDMAGNRKIDRVLIYYRDDSSNINK CCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCE LYLATYKDVEKVEDGRYCVYFEHCQYVGKTEQNWVEFTGAQQAVRYFE EEEEECCCHHHCCCCCEEEEEEEECCCCCCCCCEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA