| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mhpC [C]
Identifier: 159896707
GI number: 159896707
Start: 203292
End: 204662
Strand: Direct
Name: mhpC [C]
Synonym: Haur_0174
Alternate gene names: 159896707
Gene position: 203292-204662 (Clockwise)
Preceding gene: 159896704
Following gene: 159896708
Centisome position: 3.2
GC content: 51.71
Gene sequence:
>1371_bases ATGTCAACCTATGTCATCGACGGACAGGAACTGCATATCCGCGATAATCGCCGTAATGCCCCCGTCGCCTTATTAATTCA TGGCTGGTCGAGTTCATGGTTTACTTGGACTCCCCTGTTGCAAGCTCTGGGCACACGCTATTCGTATATGGCGGTCGATT TGCCTGGCTATGGGCGGTCGCCTGCGCCCAAACACCCAATTACCATCGATTGGTATGCCGATTTGATGGCCAAATTGATC GAGGAAGCCAGCGATCGGCCTGTCGTGGTGCTTGGGCATTCGATGGGCGGCCAAATTGCCATGACTTTAGCCCTGCGCCA CCCGATGCTGGTCGAACGTTTGATTTTGCTCAATCCAGTGGTCAGCGGGCGACTATCAACCTTTATCAATTTGTTTGTGG CTCCGCATATTTTGCTCGAACGCACGCGATTGGGCGGCAAAATTTTGAGTTATCTCGAAAATACGCCGTTAAGCTATATC AATCAATTGATGAAGCCGATTCTCTTTGCTGAACGCGCCGCAATTTCGCAGCAAGATTATGATCGGATTCGCGCTGATGC GCGGCGGCCAGGCCAAGGCAGAGTTCGCGCCGCTTGCTACGAAGCGATGAAAATGGGCGATCTGCGTGGCAAACTCAAGC AAATTCAGCCGCCAGCTCAAGTGATTTGGGGTGCTGAGGATAATACTGTGCCGTTGCGTGATGCTGGTGCGGTAGCCGAC GAATGGCCGCAAGCTGATTTGCGCTTGATTCCAAATGCTGGGCATTGGCCGCATTTTGAGCAATATGAAACCACGATGCG CTATATTGCCTCATTTTTGGGCTTGCCAATTTTGCCAAGCCTGCCAAACGATCAAGTACAACAGCAGCGTGATCTTGATG TTGGAGAAATTGCCCAGTTCCTCTCGAATACTGAGTTAGGCCAAGATTTAAGTGAATCGCAGCGCTTACGGGTGGCGGGC TTGTGTCATCAACATCATTTTGCCCCGCAAGATGTCTTGGCGCTCGAAGATTCGAGCGGCGATGAATTATTTATTGTGCA AGATGGCCAAGTTGATGTCTTGGTGCGAATCAGCAATGAACTTGGGATCGAGGAATCGCGGCGGGTTAATGTGCTAATGG CGGGCCAAATCGCTGGCGAAATGGCCTTGATTCAAGGCAAAGGTGGCCGCCGTACCGCCGATTTACGCGCTGGCAAGTCG GGCGCAACCGTGCTGTCGATCGATAGCCGCTATCTGTTTGCTTTGTTTGAAGATGATGCCTCGTTGGGCCTGAAGTTGAT GCAAAATCTGGCTCGCTCGTTGGTGCAACGGTTGCGGGTGCAAAATTGGCAATTGCAACTAGCTGAACAACGCGCCGAAG TTCATCGCTAA
Upstream 100 bases:
>100_bases CCCTAACTTCTACTAACTAGCCTCGTATCTAGGGAACCCACTTGCCTCAATATGCTACAATAGCCCAATTATGTAATTGT TCCTGCAATGAGGGTAGTGC
Downstream 100 bases:
>100_bases ACAACCGCAAAATCATGACTTTTGGCTTGAACGCTACTGTTTTACCGGTGGCGTTTTTCGTGTACCATTTGCCATGAACC ACAAATTGTAGGGTGTTGTG
Product: cyclic nucleotide-binding protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSTYVIDGQELHIRDNRRNAPVALLIHGWSSSWFTWTPLLQALGTRYSYMAVDLPGYGRSPAPKHPITIDWYADLMAKLI EEASDRPVVVLGHSMGGQIAMTLALRHPMLVERLILLNPVVSGRLSTFINLFVAPHILLERTRLGGKILSYLENTPLSYI NQLMKPILFAERAAISQQDYDRIRADARRPGQGRVRAACYEAMKMGDLRGKLKQIQPPAQVIWGAEDNTVPLRDAGAVAD EWPQADLRLIPNAGHWPHFEQYETTMRYIASFLGLPILPSLPNDQVQQQRDLDVGEIAQFLSNTELGQDLSESQRLRVAG LCHQHHFAPQDVLALEDSSGDELFIVQDGQVDVLVRISNELGIEESRRVNVLMAGQIAGEMALIQGKGGRRTADLRAGKS GATVLSIDSRYLFALFEDDASLGLKLMQNLARSLVQRLRVQNWQLQLAEQRAEVHR
Sequences:
>Translated_456_residues MSTYVIDGQELHIRDNRRNAPVALLIHGWSSSWFTWTPLLQALGTRYSYMAVDLPGYGRSPAPKHPITIDWYADLMAKLI EEASDRPVVVLGHSMGGQIAMTLALRHPMLVERLILLNPVVSGRLSTFINLFVAPHILLERTRLGGKILSYLENTPLSYI NQLMKPILFAERAAISQQDYDRIRADARRPGQGRVRAACYEAMKMGDLRGKLKQIQPPAQVIWGAEDNTVPLRDAGAVAD EWPQADLRLIPNAGHWPHFEQYETTMRYIASFLGLPILPSLPNDQVQQQRDLDVGEIAQFLSNTELGQDLSESQRLRVAG LCHQHHFAPQDVLALEDSSGDELFIVQDGQVDVLVRISNELGIEESRRVNVLMAGQIAGEMALIQGKGGRRTADLRAGKS GATVLSIDSRYLFALFEDDASLGLKLMQNLARSLVQRLRVQNWQLQLAEQRAEVHR >Mature_455_residues STYVIDGQELHIRDNRRNAPVALLIHGWSSSWFTWTPLLQALGTRYSYMAVDLPGYGRSPAPKHPITIDWYADLMAKLIE EASDRPVVVLGHSMGGQIAMTLALRHPMLVERLILLNPVVSGRLSTFINLFVAPHILLERTRLGGKILSYLENTPLSYIN QLMKPILFAERAAISQQDYDRIRADARRPGQGRVRAACYEAMKMGDLRGKLKQIQPPAQVIWGAEDNTVPLRDAGAVADE WPQADLRLIPNAGHWPHFEQYETTMRYIASFLGLPILPSLPNDQVQQQRDLDVGEIAQFLSNTELGQDLSESQRLRVAGL CHQHHFAPQDVLALEDSSGDELFIVQDGQVDVLVRISNELGIEESRRVNVLMAGQIAGEMALIQGKGGRRTADLRAGKSG ATVLSIDSRYLFALFEDDASLGLKLMQNLARSLVQRLRVQNWQLQLAEQRAEVHR
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI218777840, Length=285, Percent_Identity=24.9122807017544, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI13376164, Length=285, Percent_Identity=24.9122807017544, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI218777837, Length=109, Percent_Identity=30.2752293577982, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 51069; Mature: 50938
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50042 CNMP_BINDING_3 ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYVIDGQELHIRDNRRNAPVALLIHGWSSSWFTWTPLLQALGTRYSYMAVDLPGYGRS CCEEEECCCEEEEECCCCCCCEEEEEECCCCCCEEHHHHHHHHCCCEEEEEEECCCCCCC PAPKHPITIDWYADLMAKLIEEASDRPVVVLGHSMGGQIAMTLALRHPMLVERLILLNPV CCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHHHHCHHHHHHHHHHHHH VSGRLSTFINLFVAPHILLERTRLGGKILSYLENTPLSYINQLMKPILFAERAAISQQDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHH DRIRADARRPGQGRVRAACYEAMKMGDLRGKLKQIQPPAQVIWGAEDNTVPLRDAGAVAD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEECCCCCCCCCC EWPQADLRLIPNAGHWPHFEQYETTMRYIASFLGLPILPSLPNDQVQQQRDLDVGEIAQF CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHH LSNTELGQDLSESQRLRVAGLCHQHHFAPQDVLALEDSSGDELFIVQDGQVDVLVRISNE HHCCCCCCCHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEECCC LGIEESRRVNVLMAGQIAGEMALIQGKGGRRTADLRAGKSGATVLSIDSRYLFALFEDDA CCCCCCCEEEEEEECCCCCCEEEEECCCCCEEHHCCCCCCCCEEEEECCCEEEEEECCCH SLGLKLMQNLARSLVQRLRVQNWQLQLAEQRAEVHR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure STYVIDGQELHIRDNRRNAPVALLIHGWSSSWFTWTPLLQALGTRYSYMAVDLPGYGRS CEEEECCCEEEEECCCCCCCEEEEEECCCCCCEEHHHHHHHHCCCEEEEEEECCCCCCC PAPKHPITIDWYADLMAKLIEEASDRPVVVLGHSMGGQIAMTLALRHPMLVERLILLNPV CCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHHHHCHHHHHHHHHHHHH VSGRLSTFINLFVAPHILLERTRLGGKILSYLENTPLSYINQLMKPILFAERAAISQQDY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHH DRIRADARRPGQGRVRAACYEAMKMGDLRGKLKQIQPPAQVIWGAEDNTVPLRDAGAVAD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEECCCCCCCCCC EWPQADLRLIPNAGHWPHFEQYETTMRYIASFLGLPILPSLPNDQVQQQRDLDVGEIAQF CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHH LSNTELGQDLSESQRLRVAGLCHQHHFAPQDVLALEDSSGDELFIVQDGQVDVLVRISNE HHCCCCCCCHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEECCC LGIEESRRVNVLMAGQIAGEMALIQGKGGRRTADLRAGKSGATVLSIDSRYLFALFEDDA CCCCCCCEEEEEEECCCCCCEEEEECCCCCEEHHCCCCCCCCEEEEECCCEEEEEECCCH SLGLKLMQNLARSLVQRLRVQNWQLQLAEQRAEVHR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]