| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896697
Identifier: 159896697
GI number: 159896697
Start: 197084
End: 197620
Strand: Direct
Name: 159896697
Synonym: Haur_0164
Alternate gene names: NA
Gene position: 197084-197620 (Clockwise)
Preceding gene: 159896696
Following gene: 159896698
Centisome position: 3.11
GC content: 54.0
Gene sequence:
>537_bases ATGAAGCGTTGTGAACATCGTACCAACTATGATCTGCGTGAAGAAGCGCTTGATCCACAACTTACAGACCATCTTGCTGA ATGTGAAAGCTGTGCGCAACGTGCTCGCCGCGCCGAAGCCTTCGATACTGTCGTGCGCTCAGCGATGATTACCAGTGTTC CCGATGATCTGACTGCCAAGCTCTTGGCCTTGGTGCCAGGTTTGATGCCACCAATGTTGGTGCGCAGCAAGCACTGGAAG TTGCAACGCCGCGCCTTCGTTGGCCTCAGTGGCTTTGCCAGCATCTTGGCGCTTGGTTTGCTGATCTACGGGGTGTATCT CTTGGCAAACACGGTTGGGGTTGGCGATTGGCTGGCGACTGCTAGCACGTGGCCTGGGGTTGCCATCGATTGGCTCTATC GGCATATTCCATCATCGCGCTCGTTTGTCGCCGCAATGATTGCCGTGCGCCAACCATTGCAATGGATGATTCTGTTGCTG CTGATTTGGCAAGTTTGGGAACGCATGCCTCTACCCAATAATCGACAAACCGCCTAA
Upstream 100 bases:
>100_bases AATCGGAAGCAATTTTGCCCGCCAAACGTGAACCTGTTACCGATGAACGGCCAAACCGCGGTCGCTTTGCATTTGCCCTA GGCTGGCGCTGAGGTGTGTC
Downstream 100 bases:
>100_bases AAGCGTAACCCGCAAGTCAACTGGCTTGCGGGTTTTTTGATTTGGGGCTACGATGATCAACCGTTTATGGAATAGCTTGC TTGATCTCGTTTACCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKRCEHRTNYDLREEALDPQLTDHLAECESCAQRARRAEAFDTVVRSAMITSVPDDLTAKLLALVPGLMPPMLVRSKHWK LQRRAFVGLSGFASILALGLLIYGVYLLANTVGVGDWLATASTWPGVAIDWLYRHIPSSRSFVAAMIAVRQPLQWMILLL LIWQVWERMPLPNNRQTA
Sequences:
>Translated_178_residues MKRCEHRTNYDLREEALDPQLTDHLAECESCAQRARRAEAFDTVVRSAMITSVPDDLTAKLLALVPGLMPPMLVRSKHWK LQRRAFVGLSGFASILALGLLIYGVYLLANTVGVGDWLATASTWPGVAIDWLYRHIPSSRSFVAAMIAVRQPLQWMILLL LIWQVWERMPLPNNRQTA >Mature_178_residues MKRCEHRTNYDLREEALDPQLTDHLAECESCAQRARRAEAFDTVVRSAMITSVPDDLTAKLLALVPGLMPPMLVRSKHWK LQRRAFVGLSGFASILALGLLIYGVYLLANTVGVGDWLATASTWPGVAIDWLYRHIPSSRSFVAAMIAVRQPLQWMILLL LIWQVWERMPLPNNRQTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20139; Mature: 20139
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCEHRTNYDLREEALDPQLTDHLAECESCAQRARRAEAFDTVVRSAMITSVPDDLTAK CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LLALVPGLMPPMLVRSKHWKLQRRAFVGLSGFASILALGLLIYGVYLLANTVGVGDWLAT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASTWPGVAIDWLYRHIPSSRSFVAAMIAVRQPLQWMILLLLIWQVWERMPLPNNRQTA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKRCEHRTNYDLREEALDPQLTDHLAECESCAQRARRAEAFDTVVRSAMITSVPDDLTAK CCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LLALVPGLMPPMLVRSKHWKLQRRAFVGLSGFASILALGLLIYGVYLLANTVGVGDWLAT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASTWPGVAIDWLYRHIPSSRSFVAAMIAVRQPLQWMILLLLIWQVWERMPLPNNRQTA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA