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The map label for this gene is yraN [C]

Identifier: 159896678

GI number: 159896678

Start: 176821

End: 177195

Strand: Reverse

Name: yraN [C]

Synonym: Haur_0145

Alternate gene names: 159896678

Gene position: 177195-176821 (Counterclockwise)

Preceding gene: 159896679

Following gene: 159896677

Centisome position: 2.79

GC content: 52.0

Gene sequence:

>375_bases
ATGGCCGACGATCGCAAAGCACTTGGGCGTTGGGGCGAGCAATATGCCGCTGAGTATCTGCAACAATTAGGTTATCAACT
GATCGCTAGTGGTTGGCATTGTCGTTGGGGTGAGATCGATCTGATCGCCTATGATCAAGCAACCTTGGTGATTATTGAAG
TACGCACGCGCCGAGGCACAGCCCATGGCAGCGCCGCCGAATCATTGACCCTCAAAAAACGCCAACGTTTAGCGCGGTTG
CTGCAAGCCTACCTGCAAGCCCTCGATGCCGCCCAAACCCCATGGCTCGGCGATTATCGCATCGATGCTATTGCGATCAC
ACTCTCCCGTGGTCAACCTCAACTTGAACATTTTCAAGCAATTTCAATTGAATAA

Upstream 100 bases:

>100_bases
GCTGGCTGGAGCGCCTTCGCCGTCAAACGCGGCTAATCGATACTGACCATTGAGGACACGCAACGGCGCGTGTCCGCTTG
CTATTTTAGGGGGAGCAAGC

Downstream 100 bases:

>100_bases
GCAACTATCAAGGAGTTTTCAATGACCCGTGAAGTTATCAGCACGCCCAACGCTCCCGCCGCCATCGGCCCATACTCACA
AGCAATCGCCATTGATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MADDRKALGRWGEQYAAEYLQQLGYQLIASGWHCRWGEIDLIAYDQATLVIIEVRTRRGTAHGSAAESLTLKKRQRLARL
LQAYLQALDAAQTPWLGDYRIDAIAITLSRGQPQLEHFQAISIE

Sequences:

>Translated_124_residues
MADDRKALGRWGEQYAAEYLQQLGYQLIASGWHCRWGEIDLIAYDQATLVIIEVRTRRGTAHGSAAESLTLKKRQRLARL
LQAYLQALDAAQTPWLGDYRIDAIAITLSRGQPQLEHFQAISIE
>Mature_123_residues
ADDRKALGRWGEQYAAEYLQQLGYQLIASGWHCRWGEIDLIAYDQATLVIIEVRTRRGTAHGSAAESLTLKKRQRLARLL
QAYLQALDAAQTPWLGDYRIDAIAITLSRGQPQLEHFQAISIE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y145_HERA2 (A9B5H2)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001542925.1
- GeneID:   5732054
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_0145
- HOGENOM:   HBG710155
- OMA:   RIATHYL
- BioCyc:   HAUR316274:HAUR_0145-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14054; Mature: 13923

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDRKALGRWGEQYAAEYLQQLGYQLIASGWHCRWGEIDLIAYDQATLVIIEVRTRRGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEECCCCC
AHGSAAESLTLKKRQRLARLLQAYLQALDAAQTPWLGDYRIDAIAITLSRGQPQLEHFQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHEE
ISIE
ECCC
>Mature Secondary Structure 
ADDRKALGRWGEQYAAEYLQQLGYQLIASGWHCRWGEIDLIAYDQATLVIIEVRTRRGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEECCCCC
AHGSAAESLTLKKRQRLARLLQAYLQALDAAQTPWLGDYRIDAIAITLSRGQPQLEHFQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHEE
ISIE
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA