| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896667
Identifier: 159896667
GI number: 159896667
Start: 165545
End: 165919
Strand: Direct
Name: 159896667
Synonym: Haur_0134
Alternate gene names: NA
Gene position: 165545-165919 (Clockwise)
Preceding gene: 159896666
Following gene: 159896668
Centisome position: 2.61
GC content: 50.4
Gene sequence:
>375_bases TTGATTTTTGACCTTTGCCTTTTGCCTTTCAGAGGAATTGCCATGGCCAACAGCATTAGCGATTTTTTTGGCTCGAACAA TGCTGGTTTTGGTGATGTGAATATTGATGCGGTGATTGCGGGCAATAACAATCAAATTAACAAATATTTGCAATTGCCAA CCCAAACCGACCCTTTGCCAGCCGCTTTGGCTCGCTTAGCAACCTTGCCTTTGTGCGACGTGAGGTCGCGTAAGAAACTG CTCTACGGTGCAAACACCGGATGGAGCCTGCTGTTCCACCAGCAGTACCCTACTCGGTACTGCGGGACGGTAACGTCCCG TGGAAAGCCCGAGGACAACGTATCCACGACCGACTGGTCGGGACAAGGGCTGTAA
Upstream 100 bases:
>100_bases GGTTTGATCCACGAAGGACACGAAGAGCACGAAGCATTATTGTTTAGCCACGAATTACACGAACTACACCAAAATATGCC GCTAGCCAATCGATCTAATT
Downstream 100 bases:
>100_bases AGCGCTTGTCAATCTGCAAGCATCATCAGCGGATAGGAACTAGGGTTGAATGGTATGGTCAACACACGTGAATGCTCGAT TAAACGTCGTAAGGTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MIFDLCLLPFRGIAMANSISDFFGSNNAGFGDVNIDAVIAGNNNQINKYLQLPTQTDPLPAALARLATLPLCDVRSRKKL LYGANTGWSLLFHQQYPTRYCGTVTSRGKPEDNVSTTDWSGQGL
Sequences:
>Translated_124_residues MIFDLCLLPFRGIAMANSISDFFGSNNAGFGDVNIDAVIAGNNNQINKYLQLPTQTDPLPAALARLATLPLCDVRSRKKL LYGANTGWSLLFHQQYPTRYCGTVTSRGKPEDNVSTTDWSGQGL >Mature_124_residues MIFDLCLLPFRGIAMANSISDFFGSNNAGFGDVNIDAVIAGNNNQINKYLQLPTQTDPLPAALARLATLPLCDVRSRKKL LYGANTGWSLLFHQQYPTRYCGTVTSRGKPEDNVSTTDWSGQGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13542; Mature: 13542
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFDLCLLPFRGIAMANSISDFFGSNNAGFGDVNIDAVIAGNNNQINKYLQLPTQTDPLP CEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHH AALARLATLPLCDVRSRKKLLYGANTGWSLLFHQQYPTRYCGTVTSRGKPEDNVSTTDWS HHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCC GQGL CCCC >Mature Secondary Structure MIFDLCLLPFRGIAMANSISDFFGSNNAGFGDVNIDAVIAGNNNQINKYLQLPTQTDPLP CEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHH AALARLATLPLCDVRSRKKLLYGANTGWSLLFHQQYPTRYCGTVTSRGKPEDNVSTTDWS HHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCC GQGL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA