| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ctaE [H]
Identifier: 159896639
GI number: 159896639
Start: 139805
End: 140431
Strand: Direct
Name: ctaE [H]
Synonym: Haur_0106
Alternate gene names: 159896639
Gene position: 139805-140431 (Clockwise)
Preceding gene: 159896638
Following gene: 159896640
Centisome position: 2.2
GC content: 47.85
Gene sequence:
>627_bases ATGGCACAGGCAGTCGTGCGCGATATCGATAAAAATGATCCTGGGCGTGGCCTCGATTTACGCAAACTGGGCATGTGGAC GTTCCTTGGCTCAGAAGTCTTTTTCTTCGGAGCTTTGGTGGTTACTCACCTCTCAATGCGCGGGGTTGTAGCACCATCAT CAAGCAAAGCCAATTATGATGTTGCGGCAGTTCGTAATTTGTTTGGCGATAATGTGCTGACCTCGATTCTAGCCTTCATC TTGTTGACCAGTAGTTTGACAATGGTGTTGGCACTGGATGGGGTTAAAACCAACAACCAAAAGCGTTTCCGCTTCTGGTT GGGAGCAACCATCGCCTGTGGTTTGGTCTTCTTGGGTGGTCAGGTTTACGAGTTCTATCACATTGTCCACGAAGGTGTGA CGATTAAAAATATGATGTTTGGCTCGACTTTCTTCTTTGTAACCGGCTTCCACGGAACCCACGTTGCAGTTGGGGTGGTT TGGCTCACATCATTATTGGTTTCGGCAATTCGCCACCCTGAGCGCTACAATGCTGGCAATTATATGGCTGTCGAGCTAGG CGGCTTGTATTGGCACTTTGTAGACTTAGTGTGGGTCTTGATCTTTACGGTGATCTATCTGATCTAA
Upstream 100 bases:
>100_bases CCGCTGGGTCGGCGAAATTGCCCAAGATCCGGTGCTGTAAACAACCTTGCTCGGTGTCGATTGCATGATCGGCATCGAGC CCAGTTATTTGGGAGAATCT
Downstream 100 bases:
>100_bases CCATTATTTATCCAAGGAGTACATAATGGCCCACGGTCATGATGAACACGCCCCAACCGAACACGAAGCTCATCACAGCC ATGCTAAGTTGTATGTGATC
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Caa-3605 subunit 3; Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAQAVVRDIDKNDPGRGLDLRKLGMWTFLGSEVFFFGALVVTHLSMRGVVAPSSSKANYDVAAVRNLFGDNVLTSILAFI LLTSSLTMVLALDGVKTNNQKRFRFWLGATIACGLVFLGGQVYEFYHIVHEGVTIKNMMFGSTFFFVTGFHGTHVAVGVV WLTSLLVSAIRHPERYNAGNYMAVELGGLYWHFVDLVWVLIFTVIYLI
Sequences:
>Translated_208_residues MAQAVVRDIDKNDPGRGLDLRKLGMWTFLGSEVFFFGALVVTHLSMRGVVAPSSSKANYDVAAVRNLFGDNVLTSILAFI LLTSSLTMVLALDGVKTNNQKRFRFWLGATIACGLVFLGGQVYEFYHIVHEGVTIKNMMFGSTFFFVTGFHGTHVAVGVV WLTSLLVSAIRHPERYNAGNYMAVELGGLYWHFVDLVWVLIFTVIYLI >Mature_207_residues AQAVVRDIDKNDPGRGLDLRKLGMWTFLGSEVFFFGALVVTHLSMRGVVAPSSSKANYDVAAVRNLFGDNVLTSILAFIL LTSSLTMVLALDGVKTNNQKRFRFWLGATIACGLVFLGGQVYEFYHIVHEGVTIKNMMFGSTFFFVTGFHGTHVAVGVVW LTSLLVSAIRHPERYNAGNYMAVELGGLYWHFVDLVWVLIFTVIYLI
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=127, Percent_Identity=33.0708661417323, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1786633, Length=208, Percent_Identity=29.3269230769231, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 23135; Mature: 23004
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAVVRDIDKNDPGRGLDLRKLGMWTFLGSEVFFFGALVVTHLSMRGVVAPSSSKANYD CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCH VAAVRNLFGDNVLTSILAFILLTSSLTMVLALDGVKTNNQKRFRFWLGATIACGLVFLGG HHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCH QVYEFYHIVHEGVTIKNMMFGSTFFFVTGFHGTHVAVGVVWLTSLLVSAIRHPERYNAGN HHHHHHHHHHCCCEEHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC YMAVELGGLYWHFVDLVWVLIFTVIYLI EEEEEECHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AQAVVRDIDKNDPGRGLDLRKLGMWTFLGSEVFFFGALVVTHLSMRGVVAPSSSKANYD CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCH VAAVRNLFGDNVLTSILAFILLTSSLTMVLALDGVKTNNQKRFRFWLGATIACGLVFLGG HHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCH QVYEFYHIVHEGVTIKNMMFGSTFFFVTGFHGTHVAVGVVWLTSLLVSAIRHPERYNAGN HHHHHHHHHHCCCEEHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC YMAVELGGLYWHFVDLVWVLIFTVIYLI EEEEEECHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1847686; 9384377 [H]