Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896632

Identifier: 159896632

GI number: 159896632

Start: 127983

End: 129485

Strand: Reverse

Name: 159896632

Synonym: Haur_0099

Alternate gene names: NA

Gene position: 129485-127983 (Counterclockwise)

Preceding gene: 159896633

Following gene: 159896631

Centisome position: 2.04

GC content: 52.36

Gene sequence:

>1503_bases
ATGTCATTTACACCAGCCGATTTCAAATATACCAGCCGCACCGGTGAGCTTGGCCGCCAACTCTACCCGCATCAATTGCG
CGATGATCGCTATTTGGCAGCGATTGACTATGCGATTGGCTATTACGAGCAGATGCTTGGCCGTGCGCGGCGTGAATTTG
AAGCCGCTACCTTGCTGGAGTTTTTTGGCGATCCCAAGTTGGCACGCGGCTTGGTAGCCTGTTTAAGCCAAACCTATCGC
TGGCATCAACCGCAACTAGCCGAAGTGCTCGATCAACCTACCTATGCCCAATTGGTTGAACGCGGCTTACGCAATTCAGC
CGATTTTCGGGCCTTGCTGTATGCCCATGCCAATCAAACTCATGGCTTCATTTTGCCAAGCGAACGCTGGCCTGCGGTAA
GCCAACTAGCCGCTGAATTGGGATTAACGCCCAGCCAATTTGAGCGGGTGCTCTACCTTGATGATGAGCAAGAAGCATTG
TTGGTGCGCAGCGCCGAACGCCCAGAACCAAGCGCAATCGTGGCTTTATACAATTTTCATTCGCTCGAAACTGGTTTGCG
CAACTGTCGTTCGTTGCAACTACGGCTTGATGGCGATATTAATGCCTTGGCCGTTTCAGCCCATAATTTAGCCCAACGCT
ATAACCTGCGCTACGAATTAAGCGAACCAGAAGATTGCATAGCGACGTTCGTAACCCTGACCTTGCATGGAGCCAAGGAT
GCGCTAGGCAATTGGACGCGCACAGGCCGCCGAATTGCCCGTTGTGCCTTGCGTCTACTAGCGGCCCATCCCAATGCGGC
CAGTGAAGGCCTAATTCAGGTGCATATGCAGGGCAAAAATAGCCTAATCAAGCTGGCAAAACGCGAGTTGACGGTGCTTG
GTGGCACTGCTCGTCAGCAACCAGACAACCTTGGCGATAGCTGGGAAACCACGCTTGAACAGCAATTTAGTCAAGCCTGG
AGCCGCTTGGTTAGCAAAAGCCAAAATGCAGGCTGGCGCATTCGACGTGATCCTGTGCCATTTAGTTTGGCTCATCGGTT
ACTTGTCCCCGATTTCATTGCCCAACGCGGCAGCGAACGTATTCCGATCTTTGTGCCTGCGACCGAAGCGATGGCAGCGA
GTTTGGCGCAGCGCTTGGTTGGTCAACCGAAGGTCTTGGTCGTAATTGCCAAAAGCTATCAAAACCTCTTGCGCAATTGC
CAGGTTGCCAAAGTTATGTATCAAACCACGCCCGATATGCTGACGGTGCTTGCGCAACTCGAACAACTTACCCCAGCCCA
AGCACCATTAGATCGCTGGAGTCGCCTAGCGTTGCGCTTCGATCAAGCTGGATTTGTGGCCGAAACCGAGCTTTTAGAAA
TTTTGGAATGCCGTAATCCTGTTGAAATTAGCTTAGCGCTGCGTGGTTGGCGCGAAGGCACAGCCCAGTATGTGCCAAAT
CTTGGCCTATTTACGCCGCAAAAACTGCGTGAATTAGGTAGTATGCTTGGCAAAGCCGCCTAG

Upstream 100 bases:

>100_bases
ACATCCTTCGTGTTCTTCGTGTTCTTCGCGGTTTCAACCCTTCGTGCTCTTCGTGTCCTTCGTGGATCAACCGCCGAATC
TTTAGAGTATCGGAATCATT

Downstream 100 bases:

>100_bases
GAATTCCTCTCACCCCCAACCCTTCACCTCGCTCGGCGGTAGAGCTTTCAAGGGTAGGTTTCTGTTGCGAACCACAGATA
GGCTGGTTCATCGCTGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSFTPADFKYTSRTGELGRQLYPHQLRDDRYLAAIDYAIGYYEQMLGRARREFEAATLLEFFGDPKLARGLVACLSQTYR
WHQPQLAEVLDQPTYAQLVERGLRNSADFRALLYAHANQTHGFILPSERWPAVSQLAAELGLTPSQFERVLYLDDEQEAL
LVRSAERPEPSAIVALYNFHSLETGLRNCRSLQLRLDGDINALAVSAHNLAQRYNLRYELSEPEDCIATFVTLTLHGAKD
ALGNWTRTGRRIARCALRLLAAHPNAASEGLIQVHMQGKNSLIKLAKRELTVLGGTARQQPDNLGDSWETTLEQQFSQAW
SRLVSKSQNAGWRIRRDPVPFSLAHRLLVPDFIAQRGSERIPIFVPATEAMAASLAQRLVGQPKVLVVIAKSYQNLLRNC
QVAKVMYQTTPDMLTVLAQLEQLTPAQAPLDRWSRLALRFDQAGFVAETELLEILECRNPVEISLALRGWREGTAQYVPN
LGLFTPQKLRELGSMLGKAA

Sequences:

>Translated_500_residues
MSFTPADFKYTSRTGELGRQLYPHQLRDDRYLAAIDYAIGYYEQMLGRARREFEAATLLEFFGDPKLARGLVACLSQTYR
WHQPQLAEVLDQPTYAQLVERGLRNSADFRALLYAHANQTHGFILPSERWPAVSQLAAELGLTPSQFERVLYLDDEQEAL
LVRSAERPEPSAIVALYNFHSLETGLRNCRSLQLRLDGDINALAVSAHNLAQRYNLRYELSEPEDCIATFVTLTLHGAKD
ALGNWTRTGRRIARCALRLLAAHPNAASEGLIQVHMQGKNSLIKLAKRELTVLGGTARQQPDNLGDSWETTLEQQFSQAW
SRLVSKSQNAGWRIRRDPVPFSLAHRLLVPDFIAQRGSERIPIFVPATEAMAASLAQRLVGQPKVLVVIAKSYQNLLRNC
QVAKVMYQTTPDMLTVLAQLEQLTPAQAPLDRWSRLALRFDQAGFVAETELLEILECRNPVEISLALRGWREGTAQYVPN
LGLFTPQKLRELGSMLGKAA
>Mature_499_residues
SFTPADFKYTSRTGELGRQLYPHQLRDDRYLAAIDYAIGYYEQMLGRARREFEAATLLEFFGDPKLARGLVACLSQTYRW
HQPQLAEVLDQPTYAQLVERGLRNSADFRALLYAHANQTHGFILPSERWPAVSQLAAELGLTPSQFERVLYLDDEQEALL
VRSAERPEPSAIVALYNFHSLETGLRNCRSLQLRLDGDINALAVSAHNLAQRYNLRYELSEPEDCIATFVTLTLHGAKDA
LGNWTRTGRRIARCALRLLAAHPNAASEGLIQVHMQGKNSLIKLAKRELTVLGGTARQQPDNLGDSWETTLEQQFSQAWS
RLVSKSQNAGWRIRRDPVPFSLAHRLLVPDFIAQRGSERIPIFVPATEAMAASLAQRLVGQPKVLVVIAKSYQNLLRNCQ
VAKVMYQTTPDMLTVLAQLEQLTPAQAPLDRWSRLALRFDQAGFVAETELLEILECRNPVEISLALRGWREGTAQYVPNL
GLFTPQKLRELGSMLGKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56233; Mature: 56102

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTPADFKYTSRTGELGRQLYPHQLRDDRYLAAIDYAIGYYEQMLGRARREFEAATLLE
CCCCCCCCEECCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGDPKLARGLVACLSQTYRWHQPQLAEVLDQPTYAQLVERGLRNSADFRALLYAHANQT
HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHEEECCCC
HGFILPSERWPAVSQLAAELGLTPSQFERVLYLDDEQEALLVRSAERPEPSAIVALYNFH
CCEEECCCCCCHHHHHHHHHCCCHHHCCEEEEECCCCHHHHEECCCCCCCCEEEEEEHHH
SLETGLRNCRSLQLRLDGDINALAVSAHNLAQRYNLRYELSEPEDCIATFVTLTLHGAKD
HHHHHHHHHHEEEEEECCCCCEEEEHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCHH
ALGNWTRTGRRIARCALRLLAAHPNAASEGLIQVHMQGKNSLIKLAKRELTVLGGTARQQ
HHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHEECCCCCCC
PDNLGDSWETTLEQQFSQAWSRLVSKSQNAGWRIRRDPVPFSLAHRLLVPDFIAQRGSER
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
IPIFVPATEAMAASLAQRLVGQPKVLVVIAKSYQNLLRNCQVAKVMYQTTPDMLTVLAQL
CEEEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
EQLTPAQAPLDRWSRLALRFDQAGFVAETELLEILECRNPVEISLALRGWREGTAQYVPN
HHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCC
LGLFTPQKLRELGSMLGKAA
CCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFTPADFKYTSRTGELGRQLYPHQLRDDRYLAAIDYAIGYYEQMLGRARREFEAATLLE
CCCCCCCEECCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGDPKLARGLVACLSQTYRWHQPQLAEVLDQPTYAQLVERGLRNSADFRALLYAHANQT
HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCHHHHHEEECCCC
HGFILPSERWPAVSQLAAELGLTPSQFERVLYLDDEQEALLVRSAERPEPSAIVALYNFH
CCEEECCCCCCHHHHHHHHHCCCHHHCCEEEEECCCCHHHHEECCCCCCCCEEEEEEHHH
SLETGLRNCRSLQLRLDGDINALAVSAHNLAQRYNLRYELSEPEDCIATFVTLTLHGAKD
HHHHHHHHHHEEEEEECCCCCEEEEHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCHH
ALGNWTRTGRRIARCALRLLAAHPNAASEGLIQVHMQGKNSLIKLAKRELTVLGGTARQQ
HHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHEECCCCCCC
PDNLGDSWETTLEQQFSQAWSRLVSKSQNAGWRIRRDPVPFSLAHRLLVPDFIAQRGSER
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
IPIFVPATEAMAASLAQRLVGQPKVLVVIAKSYQNLLRNCQVAKVMYQTTPDMLTVLAQL
CEEEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
EQLTPAQAPLDRWSRLALRFDQAGFVAETELLEILECRNPVEISLALRGWREGTAQYVPN
HHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCC
LGLFTPQKLRELGSMLGKAA
CCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA