Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896626

Identifier: 159896626

GI number: 159896626

Start: 119861

End: 120172

Strand: Direct

Name: 159896626

Synonym: Haur_0093

Alternate gene names: NA

Gene position: 119861-120172 (Clockwise)

Preceding gene: 159896625

Following gene: 159896628

Centisome position: 1.89

GC content: 45.83

Gene sequence:

>312_bases
ATGATGATTTTACTGCTGATTATTGGCATGGGCTGCGTGACATTTTTGCTGCGGCTCTCGTTTATTAGCGTTGCGGGTAA
AACCAGCATGCCTCAATGGTTGCAACGCTGTTTGCAATTTGTGCCGATTGCCGTGCTGATGGCAATTATTGTGCCTGATT
TAATCTATCAACAGCATCGTTATCAATTGCTCAACAATAATGAGCGCTTGATTGCGGGCTTGGTAGCGGCCTTGGTTGCT
TGGAAAACCAATAATGTGCTGCTGACGATTGGAACTGGCATGGGTTTGTTGTGGCTGTTGCAAAGCTTGTAG

Upstream 100 bases:

>100_bases
TTATGGCGGGAGCCACGGTCATGCTGCCCTATAAATTGGGCTTGGTGTTGAGTGTATTGGCGGGGGTTGGGCTTGGTTTG
TATCTTGAGGGGCGGCAGGC

Downstream 100 bases:

>100_bases
CATTTCCCTCGCTCCCTTCTCTCACGATGGTGGCAGCTAGCTTCCAAGGCTGGGTTTTAAGATCCCTCATCCCCAACCCT
TCTCCCACTGCGGCGGGAGA

Product: branched-chain amino acid transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHRYQLLNNNERLIAGLVAALVA
WKTNNVLLTIGTGMGLLWLLQSL

Sequences:

>Translated_103_residues
MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHRYQLLNNNERLIAGLVAALVA
WKTNNVLLTIGTGMGLLWLLQSL
>Mature_103_residues
MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHRYQLLNNNERLIAGLVAALVA
WKTNNVLLTIGTGMGLLWLLQSL

Specific function: Unknown

COG id: COG4392

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11524; Mature: 11524

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQLLNNNERLIAGLVAALVAWKTNNVLLTIGTGMGLLWLLQSL
HHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC
>Mature Secondary Structure
MMILLLIIGMGCVTFLLRLSFISVAGKTSMPQWLQRCLQFVPIAVLMAIIVPDLIYQQHR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQLLNNNERLIAGLVAALVAWKTNNVLLTIGTGMGLLWLLQSL
HHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA