| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896618
Identifier: 159896618
GI number: 159896618
Start: 110780
End: 111388
Strand: Reverse
Name: 159896618
Synonym: Haur_0085
Alternate gene names: NA
Gene position: 111388-110780 (Counterclockwise)
Preceding gene: 159896619
Following gene: 159896612
Centisome position: 1.76
GC content: 46.14
Gene sequence:
>609_bases ATGCCATCAACCAAGTATTATGCCTATCTCCAAACTTTTCAGGTCAAACGCTTGGAACGCGATTACAAATATCTCCTCGC CGAGCCGCAATATCATGGTTTAGCCCAATTTTTCCTTGAAGATATGTATGGGCCTTATGATTTTCATGCTCGCGATACCC AAGCCCGTCGTTTGCACCAATTTATTCACTTGGCTCCTGGCCTGAGCATCGAAGATATTGAGGTAACCCTCGATTTGCTG AACTTGACGGTCAGGCTTGATCAACAAGTCGCTGATTGGCTTGAACATAATAACTTCACGATTCCGTTTACCGAGGCTCA ATACGAAGAGGCCTATTATCGGGTCAACAGTTTTGAGCCAAGGGTGCGCCAAATCGAGCTCATTAACGAATCACTACGGC GAGTGCATCGTTTATCAAAAATTAGCCTGCTTGGCGCTGCCCTCAACAATACCAAAACCTTTGCCAAATTAATGGGTATG GGCGAGTTGCATCGCTTTTTACGCCGTGGCTATCACGCCCTTTTACCAGTTCAGGATCTTAAGCCGTTCCTGACAGAAGT GACCCACACCGAACTCGATCGGCTCAAACGAATTTATCGTTTGATGTAG
Upstream 100 bases:
>100_bases CGGCGTACCCTTTGTCCAGCAAAAAAGTATATTTCGATCCAATGACACAGCGTGCTACAATGGTTGCTATGACAGAATTC AAGCAACGGTGCTTCGCTAT
Downstream 100 bases:
>100_bases CCCAAGCCTTGCAATGCGCGTTCAGCCTCGGCATGCTCGTTCCATTCGATATCGCCGCTGGCATAAATGATGTTGCCTTC GTGGCCTTTGCCTAGCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPSTKYYAYLQTFQVKRLERDYKYLLAEPQYHGLAQFFLEDMYGPYDFHARDTQARRLHQFIHLAPGLSIEDIEVTLDLL NLTVRLDQQVADWLEHNNFTIPFTEAQYEEAYYRVNSFEPRVRQIELINESLRRVHRLSKISLLGAALNNTKTFAKLMGM GELHRFLRRGYHALLPVQDLKPFLTEVTHTELDRLKRIYRLM
Sequences:
>Translated_202_residues MPSTKYYAYLQTFQVKRLERDYKYLLAEPQYHGLAQFFLEDMYGPYDFHARDTQARRLHQFIHLAPGLSIEDIEVTLDLL NLTVRLDQQVADWLEHNNFTIPFTEAQYEEAYYRVNSFEPRVRQIELINESLRRVHRLSKISLLGAALNNTKTFAKLMGM GELHRFLRRGYHALLPVQDLKPFLTEVTHTELDRLKRIYRLM >Mature_201_residues PSTKYYAYLQTFQVKRLERDYKYLLAEPQYHGLAQFFLEDMYGPYDFHARDTQARRLHQFIHLAPGLSIEDIEVTLDLLN LTVRLDQQVADWLEHNNFTIPFTEAQYEEAYYRVNSFEPRVRQIELINESLRRVHRLSKISLLGAALNNTKTFAKLMGMG ELHRFLRRGYHALLPVQDLKPFLTEVTHTELDRLKRIYRLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24109; Mature: 23978
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTKYYAYLQTFQVKRLERDYKYLLAEPQYHGLAQFFLEDMYGPYDFHARDTQARRLHQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH FIHLAPGLSIEDIEVTLDLLNLTVRLDQQVADWLEHNNFTIPFTEAQYEEAYYRVNSFEP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCH RVRQIELINESLRRVHRLSKISLLGAALNNTKTFAKLMGMGELHRFLRRGYHALLPVQDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCHHHHCCHHHH KPFLTEVTHTELDRLKRIYRLM HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSTKYYAYLQTFQVKRLERDYKYLLAEPQYHGLAQFFLEDMYGPYDFHARDTQARRLHQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH FIHLAPGLSIEDIEVTLDLLNLTVRLDQQVADWLEHNNFTIPFTEAQYEEAYYRVNSFEP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCH RVRQIELINESLRRVHRLSKISLLGAALNNTKTFAKLMGMGELHRFLRRGYHALLPVQDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCHHHHCCHHHH KPFLTEVTHTELDRLKRIYRLM HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA