| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159896610
Identifier: 159896610
GI number: 159896610
Start: 100187
End: 101365
Strand: Reverse
Name: 159896610
Synonym: Haur_0077
Alternate gene names: NA
Gene position: 101365-100187 (Counterclockwise)
Preceding gene: 159896611
Following gene: 159896609
Centisome position: 1.6
GC content: 53.52
Gene sequence:
>1179_bases ATGGAGATGGAAGGGTTTCGTTGGTTGTTGAGCGACGCTGGCCAACAACTCTTGGCTGAACTCAGCAATGATCGCGATTT GAATGAAGCTAACTTTTTGCGCTACACCACCAAATTGCGCAAACACTACCCAGCCGAGGCGGTAACGGCGGCTTTGGAAA CCAACTTATTGCGCCGCGCCGCCCAAGCTAAATTTCCCCAAGCCAGCCAACTATATTTTACCCGTGAGGCCTTGGAGCAA GCTACGCCTTGGCTGGTTGCTAGCTATCGCCAACGCCATTTTGCGACTGGCTCGCGGCTGGTCGATTTGGGTTGCTCGGT TGGCGGCGATGCCTTGGCCTTAGCGCAAAGTTGCTCGGTTTTGGCGATCGATCGTGATCCATTGCGGTTGGCAATGCTTG AGGCCAATGCTCAGGCGCTTGGGCTAAGCCAGCAAATCAGCATCCAAGAGGCCGATTTTACCACGCTAGAATTTGCGGGC TACGCTGGTTTATTTATCGATCCGGCGCGGCGCAGCAATGGCAAGCGCATTTGGGATGTTGAGCACTATCAGCCGCCGCT TTCTACCTTGGAGCGTTGGCGTGGGCAAGTGCCAATCCATGGAGCTAAAGTTGCCCCAGGTATTCCCGATGATGCCGTGC CTGCTGGCTATGATCTTGAGTTTATTTCGCTTGATGGCGATTTGCGCGAGGCCTGTTTGTGGTGGCAAGCTGGTCAGGTT GGCGGGCAACGCAAGGCAGTGGTGCTCACTAGTGCTGGTGCTGAACACAGCTTAATTGCCGATTCCACCCAAGCCGCCGC TGCACTCAGCGAGCCACTGGCCTATTTGTACGAGCCTGATCCAGCGGTGATTCGAGCGCACGCCGTGGCAGATATTGCCA ATCAGTTGGATTTAGCTCAATTTGATGCCAGCATTGCCTACCTTACCAGTGATCGCTTGGTACAATCGCCATTTCTGCGA GCTTGGCAAATTGAGCAATGGCTACCGTTTAATTTGAAACTTCTGCGCCAAATATTGCAAGCGCGTGAGATTGGCCGCGT AACCGTCAAAAAGCGTGGCTCGCCGATTACCCCCGAAGAATTAAGCAAACAACTGCGCTTGAAGGGTCGCTACGAGCAAA CGTTGGTGCTGACCAAACTACAAGGCCAGCCAGTCGTGCTGTTGGTAAAATTGCTTTAA
Upstream 100 bases:
>100_bases CGGCGGGAGCACACCCGAGCAAAATCTTTATTGAAAATGGCCGTGAGCATGGCCCAGCCATTATCGCCGAGTTGCGCCAA CGTTGGGCAGGGCCGCGCTG
Downstream 100 bases:
>100_bases TTTGCGCTCTATCTGCTGCATATCAGCTGCCTATCAGCTACATTTGCTGCCAAAACCGCTATAAACTTCGTCTTAGGTGT AATGTCGGATTGATCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MEMEGFRWLLSDAGQQLLAELSNDRDLNEANFLRYTTKLRKHYPAEAVTAALETNLLRRAAQAKFPQASQLYFTREALEQ ATPWLVASYRQRHFATGSRLVDLGCSVGGDALALAQSCSVLAIDRDPLRLAMLEANAQALGLSQQISIQEADFTTLEFAG YAGLFIDPARRSNGKRIWDVEHYQPPLSTLERWRGQVPIHGAKVAPGIPDDAVPAGYDLEFISLDGDLREACLWWQAGQV GGQRKAVVLTSAGAEHSLIADSTQAAAALSEPLAYLYEPDPAVIRAHAVADIANQLDLAQFDASIAYLTSDRLVQSPFLR AWQIEQWLPFNLKLLRQILQAREIGRVTVKKRGSPITPEELSKQLRLKGRYEQTLVLTKLQGQPVVLLVKLL
Sequences:
>Translated_392_residues MEMEGFRWLLSDAGQQLLAELSNDRDLNEANFLRYTTKLRKHYPAEAVTAALETNLLRRAAQAKFPQASQLYFTREALEQ ATPWLVASYRQRHFATGSRLVDLGCSVGGDALALAQSCSVLAIDRDPLRLAMLEANAQALGLSQQISIQEADFTTLEFAG YAGLFIDPARRSNGKRIWDVEHYQPPLSTLERWRGQVPIHGAKVAPGIPDDAVPAGYDLEFISLDGDLREACLWWQAGQV GGQRKAVVLTSAGAEHSLIADSTQAAAALSEPLAYLYEPDPAVIRAHAVADIANQLDLAQFDASIAYLTSDRLVQSPFLR AWQIEQWLPFNLKLLRQILQAREIGRVTVKKRGSPITPEELSKQLRLKGRYEQTLVLTKLQGQPVVLLVKLL >Mature_392_residues MEMEGFRWLLSDAGQQLLAELSNDRDLNEANFLRYTTKLRKHYPAEAVTAALETNLLRRAAQAKFPQASQLYFTREALEQ ATPWLVASYRQRHFATGSRLVDLGCSVGGDALALAQSCSVLAIDRDPLRLAMLEANAQALGLSQQISIQEADFTTLEFAG YAGLFIDPARRSNGKRIWDVEHYQPPLSTLERWRGQVPIHGAKVAPGIPDDAVPAGYDLEFISLDGDLREACLWWQAGQV GGQRKAVVLTSAGAEHSLIADSTQAAAALSEPLAYLYEPDPAVIRAHAVADIANQLDLAQFDASIAYLTSDRLVQSPFLR AWQIEQWLPFNLKLLRQILQAREIGRVTVKKRGSPITPEELSKQLRLKGRYEQTLVLTKLQGQPVVLLVKLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43480; Mature: 43480
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMEGFRWLLSDAGQQLLAELSNDRDLNEANFLRYTTKLRKHYPAEAVTAALETNLLRRA CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AQAKFPQASQLYFTREALEQATPWLVASYRQRHFATGSRLVDLGCSVGGDALALAQSCSV HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCE LAIDRDPLRLAMLEANAQALGLSQQISIQEADFTTLEFAGYAGLFIDPARRSNGKRIWDV EEECCCCEEEEEEECCHHHHCCCCCCEEECCCCCEEEECCCCCEEEECHHCCCCCEEEEC EHYQPPLSTLERWRGQVPIHGAKVAPGIPDDAVPAGYDLEFISLDGDLREACLWWQAGQV CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC GGQRKAVVLTSAGAEHSLIADSTQAAAALSEPLAYLYEPDPAVIRAHAVADIANQLDLAQ CCCCEEEEEEECCCCCCEECCCHHHHHHHHCCHHEEECCCHHHEEHHHHHHHHHHHHHHH FDASIAYLTSDRLVQSPFLRAWQIEQWLPFNLKLLRQILQAREIGRVTVKKRGSPITPEE HCCEEEEEECCHHHHCHHHHHEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHH LSKQLRLKGRYEQTLVLTKLQGQPVVLLVKLL HHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC >Mature Secondary Structure MEMEGFRWLLSDAGQQLLAELSNDRDLNEANFLRYTTKLRKHYPAEAVTAALETNLLRRA CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AQAKFPQASQLYFTREALEQATPWLVASYRQRHFATGSRLVDLGCSVGGDALALAQSCSV HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCE LAIDRDPLRLAMLEANAQALGLSQQISIQEADFTTLEFAGYAGLFIDPARRSNGKRIWDV EEECCCCEEEEEEECCHHHHCCCCCCEEECCCCCEEEECCCCCEEEECHHCCCCCEEEEC EHYQPPLSTLERWRGQVPIHGAKVAPGIPDDAVPAGYDLEFISLDGDLREACLWWQAGQV CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC GGQRKAVVLTSAGAEHSLIADSTQAAAALSEPLAYLYEPDPAVIRAHAVADIANQLDLAQ CCCCEEEEEEECCCCCCEECCCHHHHHHHHCCHHEEECCCHHHEEHHHHHHHHHHHHHHH FDASIAYLTSDRLVQSPFLRAWQIEQWLPFNLKLLRQILQAREIGRVTVKKRGSPITPEE HCCEEEEEECCHHHHCHHHHHEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHH LSKQLRLKGRYEQTLVLTKLQGQPVVLLVKLL HHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA