Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896608

Identifier: 159896608

GI number: 159896608

Start: 97351

End: 98661

Strand: Direct

Name: 159896608

Synonym: Haur_0075

Alternate gene names: NA

Gene position: 97351-98661 (Clockwise)

Preceding gene: 159896607

Following gene: 159896613

Centisome position: 1.53

GC content: 51.18

Gene sequence:

>1311_bases
ATGATTCCATCGCGCCGTTTATTAGCACTTTTGCTAGCAGGCTTGGTTCCGGTGATCATCGGAGCAGCAACCCCCAGTTT
GCGCTGGACAATCTGGGTTTATGTATTGTTGCTGATTGGCTTTGTGGCGCTTGATTGGTTTATGACTCCCAAGCCTAAAT
TGTTGGAAGTAGCGCGGATCAACGAGCCAAAACTTTCAATTGGCGAACAAAACCTGATCACGCTGGCAGTGCATAATCAA
AGCCCGCGCACGCTCGAAATTCAAATTCGTGATGAGTTTCCGGTGGAGTTTCCCAGCGATACGCTGATTCTTAAAACCAA
GGTCGAGCCAGATACGGTGCAAGAGGTTAACTACCATGTACGGCCCTTGCGGCGTGGTGATTATCGCTTTGGCAATATCA
ATTTGCGCTATACCAGCACCTTTGGTACGTTCTTGCGCCAAACCAAAATCGCCTTCGACGAATTGGTCAAGGTTTATCCC
AATGTGCTTGATGTGCGCAAATACGATATGTTGGCGCGGAAGGGCATGCTGTTTGAGTTGGGGTTGCGCACCGCCCGCGT
GTTTGGCTCAGGTACCGAGTTTGAGCGCTTGCGTGAATATACGCCCGATGATGAGTTTCGCTCGATTAACTGGAAGGCCA
GCGCTCGCCGTAACAAGCTGATTGCTGCCGAATATGAGACCGAGCGTTCGCAGTATGTAGTGTCGGTGATCGACACTGGG
CGTTTGATGCGCCCAACAATCAACGATATCGCCAAGCTGGATTATGCGATCAATGCCTCGTTAATGCTGGGGTATGTGGC
GATGCTCAAAGGCGATCACATCGGCATGCTTTCGTTTGCCGACCATGTTGGGCGTTTTTTGCAGCCGCGCCGTGGTAAAG
CCCAGTTTTATCAAATGTTGGAGATGTTGTATAACTTGCCATCGCAGCCCGTCGAGGCCGATTATGGCCGCGCGATCTCC
TACTTGGGCTTGAAGAATAAGCGCCGTTCGTTAATTGTGATTTTTACCGACCTCAGCACCATGGATACCGCCAAGCCGCT
GATTCAGCATATGGCACGCTTGGCCAAAACCCACCTCGCCTTGTGTGTGGTGATGAGCGACCCCAACTTAGTCGGCTATG
CTGGCAAAGCGGCCTATAGTTCCACCGATGTGTATGAACGCGCCGTGGCCGAGATGGTGCTTGATGAACGGCGGGTAGTG
CTCGACACGCTGAATCAAGCTGGCGTACATACGATCGACGTGCCAGCCAACAAACTAACGGTTTCGGTGATTAATAAATA
TCTGGAGTTCAAAGGGCGAGGGCTTATTTAA

Upstream 100 bases:

>100_bases
ATCGCCATCGGATTATTTTGAAACCAGAGGCTGAGATTGAAGGTTTGACCCCAGATACCGCGATGACCCGGATTTTGGGG
CGTATTGAGGTTCCTCGCTG

Downstream 100 bases:

>100_bases
CCGCCAATCACGGGGCTACTCTGCCCCGTGACGGCGTGGTTCATAATAGAATCAGCACCAGAATAAACATGCTGACTACG
CCTCCGAGGGCAATCCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARINEPKLSIGEQNLITLAVHNQ
SPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHVRPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYP
NVLDVRKYDMLARKGMLFELGLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG
RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQMLEMLYNLPSQPVEADYGRAIS
YLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLALCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVV
LDTLNQAGVHTIDVPANKLTVSVINKYLEFKGRGLI

Sequences:

>Translated_436_residues
MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARINEPKLSIGEQNLITLAVHNQ
SPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHVRPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYP
NVLDVRKYDMLARKGMLFELGLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG
RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQMLEMLYNLPSQPVEADYGRAIS
YLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLALCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVV
LDTLNQAGVHTIDVPANKLTVSVINKYLEFKGRGLI
>Mature_436_residues
MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARINEPKLSIGEQNLITLAVHNQ
SPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHVRPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYP
NVLDVRKYDMLARKGMLFELGLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG
RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQMLEMLYNLPSQPVEADYGRAIS
YLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLALCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVV
LDTLNQAGVHTIDVPANKLTVSVINKYLEFKGRGLI

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49609; Mature: 49609

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARI
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEC
NEPKLSIGEQNLITLAVHNQSPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHV
CCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHCCCEE
RPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYPNVLDVRKYDMLARKGMLFEL
CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH
GLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG
HHHHHHHCCCCCHHHHHHCCCCCCHHEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC
RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQML
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
EMLYNLPSQPVEADYGRAISYLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLA
HHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEE
LCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVVLDTLNQAGVHTIDVPANKLT
EEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCHHH
VSVINKYLEFKGRGLI
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIPSRRLLALLLAGLVPVIIGAATPSLRWTIWVYVLLLIGFVALDWFMTPKPKLLEVARI
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEC
NEPKLSIGEQNLITLAVHNQSPRTLEIQIRDEFPVEFPSDTLILKTKVEPDTVQEVNYHV
CCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHCCCEE
RPLRRGDYRFGNINLRYTSTFGTFLRQTKIAFDELVKVYPNVLDVRKYDMLARKGMLFEL
CCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH
GLRTARVFGSGTEFERLREYTPDDEFRSINWKASARRNKLIAAEYETERSQYVVSVIDTG
HHHHHHHCCCCCHHHHHHCCCCCCHHEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC
RLMRPTINDIAKLDYAINASLMLGYVAMLKGDHIGMLSFADHVGRFLQPRRGKAQFYQML
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
EMLYNLPSQPVEADYGRAISYLGLKNKRRSLIVIFTDLSTMDTAKPLIQHMARLAKTHLA
HHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEE
LCVVMSDPNLVGYAGKAAYSSTDVYERAVAEMVLDERRVVLDTLNQAGVHTIDVPANKLT
EEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCHHH
VSVINKYLEFKGRGLI
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA