| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896584
Identifier: 159896584
GI number: 159896584
Start: 66439
End: 66858
Strand: Direct
Name: 159896584
Synonym: Haur_0051
Alternate gene names: NA
Gene position: 66439-66858 (Clockwise)
Preceding gene: 159896583
Following gene: 159896585
Centisome position: 1.05
GC content: 51.67
Gene sequence:
>420_bases ATGACGACAAATCAAGAACTTGCAGCCACACCTAGCAACTCGGCCCGCGTGATTGGCCTGATTGTTGGCGATGTGGCGAT TTTTGCCCTGTTTGTAATTATTGGGCGACGCTCGCATGCCGAAGGCGTGAATGCCATGGATGTGGTGAATGTGGCTGCGC CGTTTGTGATTGGTTGGGGAATTGCCGCCCCATTGCTAAAGCTGTACACTCCAGCGATCAGTGATCATACCAAAACGGCG TTACAACGCACGGCCTTGGCTTGGTGTTTGGCCGCGCCAATTGGCTTAACCTTGCGTTCAGTGCTTTGGAAACACGATTT CAAGCCAGGCTTTGCAATTACCACCTTTATTTTCAACATGATTTTGCTGCTGGCATGGCGTGGCTGGTCAGCCTATCGTA CTGGCAAACAGAGCCGCTAA
Upstream 100 bases:
>100_bases GGCTCAAACAAGCCTTTGCCGAGCGCTGGGAAGATTACTGGGAGTAATCAGCTATGCTACAATCCATGCTAGCAACTCGT TTTACAAAGGATTGTGGATT
Downstream 100 bases:
>100_bases ACCAAGTGCAGCGCGTGAACCTACATTTATGCGCTGCGCTAATGCCTATTGCTAACCTATTGCTGTCATCAACTTGCCAC ATTTGTAACTACCATTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTTNQELAATPSNSARVIGLIVGDVAIFALFVIIGRRSHAEGVNAMDVVNVAAPFVIGWGIAAPLLKLYTPAISDHTKTA LQRTALAWCLAAPIGLTLRSVLWKHDFKPGFAITTFIFNMILLLAWRGWSAYRTGKQSR
Sequences:
>Translated_139_residues MTTNQELAATPSNSARVIGLIVGDVAIFALFVIIGRRSHAEGVNAMDVVNVAAPFVIGWGIAAPLLKLYTPAISDHTKTA LQRTALAWCLAAPIGLTLRSVLWKHDFKPGFAITTFIFNMILLLAWRGWSAYRTGKQSR >Mature_138_residues TTNQELAATPSNSARVIGLIVGDVAIFALFVIIGRRSHAEGVNAMDVVNVAAPFVIGWGIAAPLLKLYTPAISDHTKTAL QRTALAWCLAAPIGLTLRSVLWKHDFKPGFAITTFIFNMILLLAWRGWSAYRTGKQSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15121; Mature: 14990
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNQELAATPSNSARVIGLIVGDVAIFALFVIIGRRSHAEGVNAMDVVNVAAPFVIGWG CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IAAPLLKLYTPAISDHTKTALQRTALAWCLAAPIGLTLRSVLWKHDFKPGFAITTFIFNM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ILLLAWRGWSAYRTGKQSR HHHHHHCCCHHHCCCCCCC >Mature Secondary Structure TTNQELAATPSNSARVIGLIVGDVAIFALFVIIGRRSHAEGVNAMDVVNVAAPFVIGWG CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IAAPLLKLYTPAISDHTKTALQRTALAWCLAAPIGLTLRSVLWKHDFKPGFAITTFIFNM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ILLLAWRGWSAYRTGKQSR HHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA