Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896573

Identifier: 159896573

GI number: 159896573

Start: 49590

End: 51005

Strand: Direct

Name: 159896573

Synonym: Haur_0040

Alternate gene names: NA

Gene position: 49590-51005 (Clockwise)

Preceding gene: 159896572

Following gene: 159896574

Centisome position: 0.78

GC content: 50.49

Gene sequence:

>1416_bases
GTGCATCATTTGCCAACGTTTCGTACATTAGGATTGCTTGGTTTGTTGGGGTTATTGTTGGTTGCCATACAACCGAGCCA
AGCCCAACAACCACTATCACCAAAAATTAGGCCCGAGCCTAGCCTGAGCAATCGGCAGCCATTGCTTAGTGCAGCCCCGC
AAGGTGGCAGTGAATGGCTGGTTCCTTGTGCTGCCAACGCTGAAAATTGGCAAAGTAGTGTGCGTGAAGATACAGCTGCG
CTCAATTGCGAAATTTATGTGCCCGAATCGGCCATGATTTTTGTGATGGCGACCGGCAGTTTTAGCATGCAAACCAATGC
TGTAACCAATACCTACGAAGGCCGAATTGGCCTAACCCTGGATGGAGTTTTGCGCGAGAGTAGCAATCGTTGGGGCAATG
TTTATGCTTTAGGTCAACTCAATACTGGCGAAACCAGCATTTTTGCCAGCACCACGGTCTTTACGGCCAGTGCCGGGGTG
CACACAGTGAGTTTAGTTGGGGGCTTTGTTGGTTATGGCCCGCTGACCTTGAACAACGCTCAACTAAGTGTTTTGGCCTT
CCCAACCAACTCGGCTAATATTCGGGTTTGCGCCACCGATACGGGCTTAGGGGTCTGGCGAGCAACGCCAACCATGAGCA
CCATTCGTTCGTGCAGCTTCAACTTGCCAAGTAATAGCACGGTATTTGTCAGCGCCGATGGTTCAGCTTTGCCAATTCCT
GGCAACGAGGTAGCCTTGCAATTTCGCTTGGGCGTTGATGAGGCTACCACTGGCGATGTACGAACTGATCGCTATGTTGA
TGTTGATAGCTTAGAACCAAATAATGAGCAAATCGATGGCAATGATATTTCGACTTCGATTGCCGCTAGCTTCAACCTAA
CTGCTGGCAACCACACCATTAATTTCTTGGGAAATGGCAGTGGCAGCAATCAGGCCTATCTGTCGCGCTCAAGTTTGGCA
GTGTTGGCCTTCCCGAGTGGTAGCCCATTCCGTACCTGCACCAGCATGAACGATACTAGTACCTTTTTCAGCAATAGCGA
ATTTAGCTCATGGGCCAATTGTCTGTTGACCGTCTCTGGTGCTCATCGCGGGATTATCGTGGGCAATGTGACAGTTGGTC
AGCAAAATGGCGAGCCGCAAGTCCGCACCCGTCTGCGAGCCAATACCGAGGTTGTGCTGGGTAGCACGCGCACCAGCGAT
TTGACGATCTTCCGTATGGTTGGCGGTCAAGGCGATGACAAGACTATGACTTCGGTTGGCATGAGCGAATTGGCTGGCGG
CCTGAATATCTTCAATTTTGATGGCTATCCATCCAACAGCAGCACCGTGCGCATGATCGATCCTAACATTCATGTACTAG
CATTTCCCGACCCATTCAGGTATAAACAATACACGCCATTAGCGCTTGGCGAATAA

Upstream 100 bases:

>100_bases
GGCATGTTGTGCTGGTAAAATTGTGCGCTTTACCATCCTTGCGCTGATCGGTCAATCTACAACGTGATGCCAGGTCATCT
TTTTTGGAAGGGAGGAACAT

Downstream 100 bases:

>100_bases
GTGTTAGCCTGTGGGGGATTCATGCGGGTCTATTTGATACGGCATGGTCAATCGGAAGAAAATGCCGCTGATTTAAAACG
CTTAATTGGACTAGAAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWLVPCAANAENWQSSVREDTAA
LNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTLDGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGV
HTVSLVGGFVGYGPLTLNNAQLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP
GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTINFLGNGSGSNQAYLSRSSLA
VLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSGAHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSD
LTIFRMVGGQGDDKTMTSVGMSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE

Sequences:

>Translated_471_residues
MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWLVPCAANAENWQSSVREDTAA
LNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTLDGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGV
HTVSLVGGFVGYGPLTLNNAQLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP
GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTINFLGNGSGSNQAYLSRSSLA
VLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSGAHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSD
LTIFRMVGGQGDDKTMTSVGMSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE
>Mature_471_residues
MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWLVPCAANAENWQSSVREDTAA
LNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTLDGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGV
HTVSLVGGFVGYGPLTLNNAQLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP
GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTINFLGNGSGSNQAYLSRSSLA
VLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSGAHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSD
LTIFRMVGGQGDDKTMTSVGMSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50093; Mature: 50093

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWL
CCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEE
VPCAANAENWQSSVREDTAALNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTL
EEECCCCHHHHHHHHHCCEEEEEEEEECCCEEEEEEEECCCEEEECCCCEEECCEEEEEE
DGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGVHTVSLVGGFVGYGPLTLNNA
HHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEHHHHHCCCCEEECCC
QLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP
EEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCEECCC
GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTI
CCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEEEEEEEECCCEEE
NFLGNGSGSNQAYLSRSSLAVLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSG
EEEECCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCHHEECCCCHHCCEEEEEEECC
AHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSDLTIFRMVGGQGDDKTMTSVG
CCCEEEEEEEEECCCCCCHHHHHEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCC
MSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE
HHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCEECCCCCCC
>Mature Secondary Structure
MHHLPTFRTLGLLGLLGLLLVAIQPSQAQQPLSPKIRPEPSLSNRQPLLSAAPQGGSEWL
CCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEE
VPCAANAENWQSSVREDTAALNCEIYVPESAMIFVMATGSFSMQTNAVTNTYEGRIGLTL
EEECCCCHHHHHHHHHCCEEEEEEEEECCCEEEEEEEECCCEEEECCCCEEECCEEEEEE
DGVLRESSNRWGNVYALGQLNTGETSIFASTTVFTASAGVHTVSLVGGFVGYGPLTLNNA
HHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEHHHHHCCCCEEECCC
QLSVLAFPTNSANIRVCATDTGLGVWRATPTMSTIRSCSFNLPSNSTVFVSADGSALPIP
EEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCEECCC
GNEVALQFRLGVDEATTGDVRTDRYVDVDSLEPNNEQIDGNDISTSIAASFNLTAGNHTI
CCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCEEEEEEEEEECCCEEE
NFLGNGSGSNQAYLSRSSLAVLAFPSGSPFRTCTSMNDTSTFFSNSEFSSWANCLLTVSG
EEEECCCCCCCEEEECCCEEEEECCCCCCCEEECCCCCCHHEECCCCHHCCEEEEEEECC
AHRGIIVGNVTVGQQNGEPQVRTRLRANTEVVLGSTRTSDLTIFRMVGGQGDDKTMTSVG
CCCEEEEEEEEECCCCCCHHHHHEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHCC
MSELAGGLNIFNFDGYPSNSSTVRMIDPNIHVLAFPDPFRYKQYTPLALGE
HHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA