| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is dnaJ [H]
Identifier: 159896562
GI number: 159896562
Start: 37027
End: 38031
Strand: Reverse
Name: dnaJ [H]
Synonym: Haur_0029
Alternate gene names: 159896562
Gene position: 38031-37027 (Counterclockwise)
Preceding gene: 159896565
Following gene: 159896561
Centisome position: 0.6
GC content: 51.84
Gene sequence:
>1005_bases ATGGATTACAAGGATTACTACACAATTCTTGGAGTAACAAAAACTGCAACCGAAGCTGAAATCAAAAAAGCCTATCGGAA ATTGGCGCGTCAATATCACCCAGACCTCAATCCCGGCGATTCTGAAGCTGAACGTAAATTTAAAGAAATCAACGAAGCCT ATGAGGTAGTGTCGGACAAAGACAAGCGAGAGAAGTACGATCGCTTCGGTGCCGATTGGGGACGCGCCCAAAGTACAGGT TCGGGGTTTAATTGGAGTCAATACGCCTCGCAACCAGGTGGTTTTGGTAGCAACTTTGGCGGCGATTTCGCCAACGGTGA GTTCTCCGATTTTTTCGAAATGTTGTTTGGCAATGCCAGCCGCCGCCAAACCAGCGGGGTCTATGGCAATCGCCGACCAC AACGCGGCCAAAATGTTGAGCAAGCCATTGATGTTACTTTAGCTGAAGTGCTCAGTGGTACCCAACGCACGCTGCAATTG CAAGCACCCGAAATGTGTAGCAATTGTGGTGGCAGTGGGGCCAGCCGTGGTAGTATTTGCCCAACCTGTGGCGGTACTGG TGTGAGCGGCACAAGCACTCGCACGATCAATGTGCGCATTCCTGCCGGAGTCGATCAAGGCTCACGCATTCGCGTTGCTG GCGAAGGCAGCCCTGGCATCGACCAAGGCAAACGTGGCGATTTGATGTTGGTGGTCAATCTCGTGCCCGATAGTCGCTTC GAGCGCAAAGGCAACGATTTACATACCGATCTCGCAGTCGATTGGCATACCCTCATCCTTGGCGGCAAAATAAAAGTTCC ATTGCCTGATGGCAAGCAATTAACCTTAACGGTGCCTGAACAGACCCAAAATGCTAAAGTGTTTCGTTTGCGCGGCCAGG GCGTGCCCAGCCTGCGCGATCAGAACACTCGCGGCGATTTGTTGGTCAAAGTTCAGGCAGTGCTACCAACCAGCCTGACT CCCAAACAGCGCGAATTGGTAATGGCTCTACGGGACAGCGAATAA
Upstream 100 bases:
>100_bases ATGTTAGAAATTAGCCGTTAACGTTGCATTATCTTGACATGCCATGGTGAGCGACGTATGATCAAATCACGTTCAGAAGT TCGCACTAGAAGGGGTTGTA
Downstream 100 bases:
>100_bases TGTCAGAAGGCAAAAATCAAAAGGCAAAAGGGTTTTGACTTCTGCCTTTTGACTTTTGATTTTGACAAAGGGTTTTTATA TGAAGTTAGAACGATTTACC
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDKDKREKYDRFGADWGRAQSTG SGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNASRRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQL QAPEMCSNCGGSGASRGSICPTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRDQNTRGDLLVKVQAVLPTSLT PKQRELVMALRDSE
Sequences:
>Translated_334_residues MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDKDKREKYDRFGADWGRAQSTG SGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNASRRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQL QAPEMCSNCGGSGASRGSICPTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRDQNTRGDLLVKVQAVLPTSLT PKQRELVMALRDSE >Mature_334_residues MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDKDKREKYDRFGADWGRAQSTG SGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNASRRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQL QAPEMCSNCGGSGASRGSICPTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRDQNTRGDLLVKVQAVLPTSLT PKQRELVMALRDSE
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360838, Length=354, Percent_Identity=28.8135593220339, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI205360840, Length=354, Percent_Identity=28.8135593220339, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI7706495, Length=346, Percent_Identity=29.7687861271676, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI4504511, Length=375, Percent_Identity=28.2666666666667, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI201862587, Length=358, Percent_Identity=28.7709497206704, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI56549115, Length=359, Percent_Identity=28.6908077994429, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI201862518, Length=358, Percent_Identity=28.7709497206704, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI194328758, Length=359, Percent_Identity=28.133704735376, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI194328760, Length=359, Percent_Identity=28.6908077994429, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI6631085, Length=355, Percent_Identity=26.7605633802817, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI5031741, Length=361, Percent_Identity=27.9778393351801, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI39204547, Length=334, Percent_Identity=26.6467065868263, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI5453690, Length=353, Percent_Identity=25.2124645892351, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI27151736, Length=108, Percent_Identity=49.0740740740741, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI88501736, Length=108, Percent_Identity=49.0740740740741, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI194306642, Length=131, Percent_Identity=41.2213740458015, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI194306640, Length=131, Percent_Identity=41.2213740458015, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI194328762, Length=329, Percent_Identity=24.0121580547112, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI23503241, Length=114, Percent_Identity=48.2456140350877, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI47777312, Length=77, Percent_Identity=53.2467532467532, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI21553335, Length=69, Percent_Identity=53.6231884057971, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI9558755, Length=106, Percent_Identity=46.2264150943396, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI24308127, Length=85, Percent_Identity=43.5294117647059, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=53.8461538461538, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI56687498, Length=120, Percent_Identity=41.6666666666667, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI29126218, Length=65, Percent_Identity=53.8461538461538, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI72534740, Length=140, Percent_Identity=36.4285714285714, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI22749377, Length=115, Percent_Identity=38.2608695652174, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI217035105, Length=73, Percent_Identity=43.8356164383562, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1786197, Length=371, Percent_Identity=36.9272237196765, Blast_Score=220, Evalue=9e-59, Organism=Escherichia coli, GI1787235, Length=331, Percent_Identity=34.1389728096677, Blast_Score=161, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17534355, Length=347, Percent_Identity=29.3948126801153, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17553096, Length=367, Percent_Identity=29.1553133514986, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17553098, Length=367, Percent_Identity=29.1553133514986, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17507263, Length=361, Percent_Identity=26.5927977839335, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17554644, Length=100, Percent_Identity=48, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI212645553, Length=69, Percent_Identity=55.0724637681159, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538236, Length=121, Percent_Identity=39.6694214876033, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI86563276, Length=115, Percent_Identity=40.8695652173913, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532378, Length=67, Percent_Identity=49.2537313432836, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115532476, Length=67, Percent_Identity=50.7462686567164, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17568643, Length=65, Percent_Identity=56.9230769230769, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17554900, Length=65, Percent_Identity=46.1538461538462, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17563890, Length=66, Percent_Identity=51.5151515151515, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=356, Percent_Identity=30.8988764044944, Blast_Score=127, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323870, Length=370, Percent_Identity=28.1081081081081, Blast_Score=112, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6321094, Length=391, Percent_Identity=29.923273657289, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323119, Length=401, Percent_Identity=26.1845386533666, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324252, Length=419, Percent_Identity=21.9570405727924, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6320888, Length=132, Percent_Identity=41.6666666666667, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322194, Length=122, Percent_Identity=42.6229508196721, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323813, Length=125, Percent_Identity=44.8, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324321, Length=69, Percent_Identity=52.1739130434783, Blast_Score=76, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6322388, Length=114, Percent_Identity=38.5964912280702, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=55.5555555555556, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI85726398, Length=366, Percent_Identity=30.6010928961749, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI45549272, Length=389, Percent_Identity=28.7917737789203, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI45552813, Length=389, Percent_Identity=28.7917737789203, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI45552811, Length=381, Percent_Identity=28.3464566929134, Blast_Score=131, Evalue=6e-31, Organism=Drosophila melanogaster, GI19920464, Length=348, Percent_Identity=27.5862068965517, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI24646562, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24646560, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24646558, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24646556, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI21357547, Length=366, Percent_Identity=28.6885245901639, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24658562, Length=341, Percent_Identity=26.6862170087977, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI24658555, Length=341, Percent_Identity=26.6862170087977, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI20129487, Length=372, Percent_Identity=27.6881720430108, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24584014, Length=372, Percent_Identity=27.6881720430108, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI18858081, Length=366, Percent_Identity=29.5081967213115, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24654066, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654070, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654068, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654072, Length=69, Percent_Identity=56.5217391304348, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=57.8125, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=55.3846153846154, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=55.3846153846154, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=55.3846153846154, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21358273, Length=119, Percent_Identity=41.1764705882353, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=47.8260869565217, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641698, Length=91, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24641696, Length=91, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=50.7246376811594, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=50.7246376811594, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357687, Length=65, Percent_Identity=44.6153846153846, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24651436, Length=66, Percent_Identity=42.4242424242424, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 36544; Mature: 36544
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDK CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH DKREKYDRFGADWGRAQSTGSGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNAS HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC RRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQLQAPEMCSNCGGSGASRGSIC CHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCC PTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCHH ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRD HHCCCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC QNTRGDLLVKVQAVLPTSLTPKQRELVMALRDSE CCCCCCEEEEEEEECCCCCCCHHHHHEEEEECCC >Mature Secondary Structure MDYKDYYTILGVTKTATEAEIKKAYRKLARQYHPDLNPGDSEAERKFKEINEAYEVVSDK CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH DKREKYDRFGADWGRAQSTGSGFNWSQYASQPGGFGSNFGGDFANGEFSDFFEMLFGNAS HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC RRQTSGVYGNRRPQRGQNVEQAIDVTLAEVLSGTQRTLQLQAPEMCSNCGGSGASRGSIC CHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCC PTCGGTGVSGTSTRTINVRIPAGVDQGSRIRVAGEGSPGIDQGKRGDLMLVVNLVPDSRF CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCHH ERKGNDLHTDLAVDWHTLILGGKIKVPLPDGKQLTLTVPEQTQNAKVFRLRGQGVPSLRD HHCCCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC QNTRGDLLVKVQAVLPTSLTPKQRELVMALRDSE CCCCCCEEEEEEEECCCCCCCHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA