Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896544

Identifier: 159896544

GI number: 159896544

Start: 11991

End: 12365

Strand: Reverse

Name: 159896544

Synonym: Haur_0011

Alternate gene names: NA

Gene position: 12365-11991 (Counterclockwise)

Preceding gene: 159896545

Following gene: 159896543

Centisome position: 0.19

GC content: 54.67

Gene sequence:

>375_bases
ATGATCGGCGGTGGCTTGATTTTCAGCCTGACCGCTAGCCCCTCTCGTTGCGAGAGGCCAGCACAAAGGAGCAACCCCAT
GATGCAAGAATACGATTTAAGCTATCAACGCCAACACGAGCTGCTTGAGCATTTGGCCGAGCTAGCGAACTGGTGGCGCT
TTGCCAACACGGCTCGTCGCCCAATGTTGGTCGAAGCCTATCACGAAACCCTCGATGCGCTCTATACGGCAGGCTGGAAC
GCCGAATTAGCGCCACCGCAATTGTTGCCACCATGGCTGATGCCCGATTGTTATCTTGCCAAACACCCTCATCCCTGCGC
CAACGACCCTCAATCACTCCACGATTTATTTGGCGAACGAGACTGTATCGCCTAA

Upstream 100 bases:

>100_bases
GATCAGGTTGTCGTTTGGCTAAAAAGTAGGGTACTATACCCAATACAACCCTTGTTTGCACCCCATAGTTCACCCTCAAC
CATGCGGAGGTAGATATTTG

Downstream 100 bases:

>100_bases
TCTAGCGTTATCGAGAAAGTCCAATGTGCAACGGCGCAACTCCTCGCAACAGCTAAAGGTTTAGCCAAACTAAGCCCATT
TCTTAACATGCCATTTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MIGGGLIFSLTASPSRCERPAQRSNPMMQEYDLSYQRQHELLEHLAELANWWRFANTARRPMLVEAYHETLDALYTAGWN
AELAPPQLLPPWLMPDCYLAKHPHPCANDPQSLHDLFGERDCIA

Sequences:

>Translated_124_residues
MIGGGLIFSLTASPSRCERPAQRSNPMMQEYDLSYQRQHELLEHLAELANWWRFANTARRPMLVEAYHETLDALYTAGWN
AELAPPQLLPPWLMPDCYLAKHPHPCANDPQSLHDLFGERDCIA
>Mature_124_residues
MIGGGLIFSLTASPSRCERPAQRSNPMMQEYDLSYQRQHELLEHLAELANWWRFANTARRPMLVEAYHETLDALYTAGWN
AELAPPQLLPPWLMPDCYLAKHPHPCANDPQSLHDLFGERDCIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14216; Mature: 14216

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGGGLIFSLTASPSRCERPAQRSNPMMQEYDLSYQRQHELLEHLAELANWWRFANTARR
CCCCCEEEEECCCCHHHCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PMLVEAYHETLDALYTAGWNAELAPPQLLPPWLMPDCYLAKHPHPCANDPQSLHDLFGER
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCC
DCIA
CCCC
>Mature Secondary Structure
MIGGGLIFSLTASPSRCERPAQRSNPMMQEYDLSYQRQHELLEHLAELANWWRFANTARR
CCCCCEEEEECCCCHHHCCCHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PMLVEAYHETLDALYTAGWNAELAPPQLLPPWLMPDCYLAKHPHPCANDPQSLHDLFGER
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCC
DCIA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA