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The map label for this gene is cpsA1 [H]

Identifier: 159896537

GI number: 159896537

Start: 4561

End: 5760

Strand: Reverse

Name: cpsA1 [H]

Synonym: Haur_0004

Alternate gene names: 159896537

Gene position: 5760-4561 (Counterclockwise)

Preceding gene: 159896540

Following gene: 159896536

Centisome position: 0.09

GC content: 54.42

Gene sequence:

>1200_bases
ATGGCTAGTCGTCCAGATTTTCGGTATGTTGCTCACACGTTGGTCGAGCAATTGATCACTGATCGCCGCGATTTACACCA
GCATCCTGAACTTGGCTTCGAGGAGTTTCGTACCGCCAAAATTGTGGCTGATCGTTTGCGTGAGTTAGGCTACGAGGTTA
CCGAGGGGGTTGCCACCACCGGCGTTTTAGGCCATATTCCGGCTCAGCCAGGCGGCAAAGTTGCCATGTTGCGCTTCGAC
ATGGATGCCTTGCCAATCCACGAGCAAAACGATGTCGATTACCGCTCAACCATCGACGGCAAAATGCATGCTTGTGGCCA
TGATGGCCATGTTGCGATCGGCTTAGGCGTGGCCGCAGCCCTGATGCAAAATCGCGAAGCGCTTGGCACAGGTGGGATTA
AATTGCTATTCCAGCCTGCCGAAGAAGGCGGCGGCGGCGCTCAAAAGATGGTCGAAGCAGGCGCGATGCAAAATCCACGG
CCTGATATTTCGCTTGGTTTGCATATTTGGGCACCCATGCCCTTGGGTAAAGCCAATGTGCGTTCAGGGCCAATTATGGC
TTCTGCCGATACCTTTATCGTGGAAATTACTGGCAAAGGTGGCCACGGCGCTCAGCCTGAAACTACCGTCGATTCGGTTT
TGGTGGCTTCACATATGGTCGTTGCGTTGCATTCAATCGTTAGCCGCAACGTTCACCCTGAACAGCCCGCAGTGCTTTCG
GTTGGTTCGGTACAAGCTGGCACAGCTCATAATATCATCGCCCACAACGCCACTCTAACTGGCACAATTCGCAGCTATGA
CCCCGAAGCTCGCGAGCGCTTGAAACAACGAGTGCATGAAGTAGTGCAAGGCGTGGCGGCAACCTTTGGCGCAACCGCTA
CCCTCAAATACGATGAAATGTGCCCAGCAACCATCTGCGACCCTGCGGCAACCGCCTTGGTACGTGGTGCAGCTGAAGCG
ATTTTGGGCGCGGAGAACGTCGATGACAGCGTGCGCACCATGGGTTCAGAAGATATGTCGGTGCTGTTGAATGAAGTGCC
TGGCTGCTATTTCTTCTTGGGCGGGCAAACCCTTGAGCGCGAGTTGGGCGCACATCCGCATCATCACCCAGCATTTAGCT
TCGATGAAGGCGTATTGCCCTTGGGCGTTGCCATTTTATGTGAAGCCGCAACCCGCTATCTCAACGGGAGCAACGAATGA

Upstream 100 bases:

>100_bases
GTGATTTTTTGCCAATCTCAGCTTTTGTCAAAGATCAAAATCTGTGTAGCATGACAGTAGTGGTCTTTTCGGCGCAAGCT
CACAATTAAAGGAGTTGTCT

Downstream 100 bases:

>100_bases
TCCAACGCCTTTGGTTCCAACGCTTGCTGCAACTTGGCCTGATCATCAGCCTAACTGGCTGTGGTGCAACGACTGGAACA
CCTGTTGCCAATCCAGTTCA

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MASRPDFRYVAHTLVEQLITDRRDLHQHPELGFEEFRTAKIVADRLRELGYEVTEGVATTGVLGHIPAQPGGKVAMLRFD
MDALPIHEQNDVDYRSTIDGKMHACGHDGHVAIGLGVAAALMQNREALGTGGIKLLFQPAEEGGGGAQKMVEAGAMQNPR
PDISLGLHIWAPMPLGKANVRSGPIMASADTFIVEITGKGGHGAQPETTVDSVLVASHMVVALHSIVSRNVHPEQPAVLS
VGSVQAGTAHNIIAHNATLTGTIRSYDPEARERLKQRVHEVVQGVAATFGATATLKYDEMCPATICDPAATALVRGAAEA
ILGAENVDDSVRTMGSEDMSVLLNEVPGCYFFLGGQTLERELGAHPHHHPAFSFDEGVLPLGVAILCEAATRYLNGSNE

Sequences:

>Translated_399_residues
MASRPDFRYVAHTLVEQLITDRRDLHQHPELGFEEFRTAKIVADRLRELGYEVTEGVATTGVLGHIPAQPGGKVAMLRFD
MDALPIHEQNDVDYRSTIDGKMHACGHDGHVAIGLGVAAALMQNREALGTGGIKLLFQPAEEGGGGAQKMVEAGAMQNPR
PDISLGLHIWAPMPLGKANVRSGPIMASADTFIVEITGKGGHGAQPETTVDSVLVASHMVVALHSIVSRNVHPEQPAVLS
VGSVQAGTAHNIIAHNATLTGTIRSYDPEARERLKQRVHEVVQGVAATFGATATLKYDEMCPATICDPAATALVRGAAEA
ILGAENVDDSVRTMGSEDMSVLLNEVPGCYFFLGGQTLERELGAHPHHHPAFSFDEGVLPLGVAILCEAATRYLNGSNE
>Mature_398_residues
ASRPDFRYVAHTLVEQLITDRRDLHQHPELGFEEFRTAKIVADRLRELGYEVTEGVATTGVLGHIPAQPGGKVAMLRFDM
DALPIHEQNDVDYRSTIDGKMHACGHDGHVAIGLGVAAALMQNREALGTGGIKLLFQPAEEGGGGAQKMVEAGAMQNPRP
DISLGLHIWAPMPLGKANVRSGPIMASADTFIVEITGKGGHGAQPETTVDSVLVASHMVVALHSIVSRNVHPEQPAVLSV
GSVQAGTAHNIIAHNATLTGTIRSYDPEARERLKQRVHEVVQGVAATFGATATLKYDEMCPATICDPAATALVRGAAEAI
LGAENVDDSVRTMGSEDMSVLLNEVPGCYFFLGGQTLERELGAHPHHHPAFSFDEGVLPLGVAILCEAATRYLNGSNE

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=435, Percent_Identity=30.8045977011494, Blast_Score=144, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42452; Mature: 42320

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRPDFRYVAHTLVEQLITDRRDLHQHPELGFEEFRTAKIVADRLRELGYEVTEGVATT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCHHHC
GVLGHIPAQPGGKVAMLRFDMDALPIHEQNDVDYRSTIDGKMHACGHDGHVAIGLGVAAA
CHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCEEECCCCCCEEEHHHHHHH
LMQNREALGTGGIKLLFQPAEEGGGGAQKMVEAGAMQNPRPDISLGLHIWAPMPLGKANV
HHHCCHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCC
RSGPIMASADTFIVEITGKGGHGAQPETTVDSVLVASHMVVALHSIVSRNVHPEQPAVLS
CCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VGSVQAGTAHNIIAHNATLTGTIRSYDPEARERLKQRVHEVVQGVAATFGATATLKYDEM
ECCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHCC
CPATICDPAATALVRGAAEAILGAENVDDSVRTMGSEDMSVLLNEVPGCYFFLGGQTLER
CCCHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCEEEEECCCHHHH
ELGAHPHHHPAFSFDEGVLPLGVAILCEAATRYLNGSNE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASRPDFRYVAHTLVEQLITDRRDLHQHPELGFEEFRTAKIVADRLRELGYEVTEGVATT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCHHHC
GVLGHIPAQPGGKVAMLRFDMDALPIHEQNDVDYRSTIDGKMHACGHDGHVAIGLGVAAA
CHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCEEECCCCCCEEEHHHHHHH
LMQNREALGTGGIKLLFQPAEEGGGGAQKMVEAGAMQNPRPDISLGLHIWAPMPLGKANV
HHHCCHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCC
RSGPIMASADTFIVEITGKGGHGAQPETTVDSVLVASHMVVALHSIVSRNVHPEQPAVLS
CCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VGSVQAGTAHNIIAHNATLTGTIRSYDPEARERLKQRVHEVVQGVAATFGATATLKYDEM
ECCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHCC
CPATICDPAATALVRGAAEAILGAENVDDSVRTMGSEDMSVLLNEVPGCYFFLGGQTLER
CCCHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCEEEEECCCHHHH
ELGAHPHHHPAFSFDEGVLPLGVAILCEAATRYLNGSNE
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]