Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yfbL [C]

Identifier: 159896536

GI number: 159896536

Start: 3605

End: 4564

Strand: Reverse

Name: yfbL [C]

Synonym: Haur_0003

Alternate gene names: 159896536

Gene position: 4564-3605 (Counterclockwise)

Preceding gene: 159896537

Following gene: 159896535

Centisome position: 0.07

GC content: 54.06

Gene sequence:

>960_bases
ATGATCCAACGCCTTTGGTTCCAACGCTTGCTGCAACTTGGCCTGATCATCAGCCTAACTGGCTGTGGTGCAACGACTGG
AACACCTGTTGCCAATCCAGTTCAAACAGTTGCCGCCACGAGTGCGCCGACGATTGTGCCCTTGCCCAAGCCTAGCCTAA
CCGAAAGCCCCCAATTCAACGGGGCCAACGCCATGGAATTTGCCAAAGTTCAAATGCAATGGATTCCGCGCGATACGGGC
ACACCAGGCTGGCAAGCTAACGGCGATTGGATTGTACAGACTTTGTTGGAATATGGCTGGGATGTTGAAGAACAATTTTT
CAACGTGCCCGAAAATAAAAAAGGCCGCAATATTATCGCCCGCCGTGGCACTGGACCATTGGTCTTGCTTGGGGCGCACT
ACGATGCTCGCCGTTACGCAGATAATGATCCCGACCCAACCAAGCGGATGCAGCCCGTACCAGCTGCCAACGATGGAGCC
AGCGGCGTTGCGGTGCTGCTGGAATTGGCGCGGGTACTCAAGCCCGAACGGCTCAACGAGGAAGTTTGGTTGGTGTTTTT
CGATGCCGAGGATAATGGTGGGATTGGCACATGGAACTGGACGCTTGGCTCAATCGACCTAGCTCCCAAGCTCGAAACCA
CGCCCAAAGCTGTGGTGATCGTCGATATGATTGGCGATGCTGATCAACAGGTCTACCTGGAGCAAAGCTCAACGCCGGCT
TTACGGGCCGAAATTTGGCAACAAGCCGCCGATTTGGGTTATACCACCTTCATTTCGGAAACCAAACACCATATTCTTGA
TGATCATACCGCCTTCTTGCAACGCGGCTTTAGCGCCGCCGACCTAATCGACTTCGATTACCCGCATTGGCACACCACCA
GCGATACGATCGATAAGCTCAGTGCCTCGGCACTAGAAGCAGTCGGTCGCACGCTCGAAGAGTGGCTCACCAAGCAGTAA

Upstream 100 bases:

>100_bases
CGCATCATCACCCAGCATTTAGCTTCGATGAAGGCGTATTGCCCTTGGGCGTTGCCATTTTATGTGAAGCCGCAACCCGC
TATCTCAACGGGAGCAACGA

Downstream 100 bases:

>100_bases
ACCATCTCGCGTGTCAGCATCAATGAATGATCGGTGCTGACACGTAAACCTTCCCTAACCTCATAACACGCATCGCTGCA
ACTCCTCGATTAATCTTGAT

Product: peptidase M28

Products: NA

Alternate protein names: Leucine Aminopeptidase; Glutamine Cyclotransferase-Related Protein; M28 Family Peptidase; Aminopeptidase; Glutaminyl Cyclase; M20/M25/M40 Family Peptidase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFNGANAMEFAKVQMQWIPRDTG
TPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIARRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGA
SGVAVLLELARVLKPERLNEEVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA
LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKLSASALEAVGRTLEEWLTKQ

Sequences:

>Translated_319_residues
MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFNGANAMEFAKVQMQWIPRDTG
TPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIARRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGA
SGVAVLLELARVLKPERLNEEVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA
LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKLSASALEAVGRTLEEWLTKQ
>Mature_319_residues
MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFNGANAMEFAKVQMQWIPRDTG
TPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIARRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGA
SGVAVLLELARVLKPERLNEEVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA
LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKLSASALEAVGRTLEEWLTKQ

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35293; Mature: 35293

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFN
CCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCC
GANAMEFAKVQMQWIPRDTGTPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIA
CCCHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEE
RRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGASGVAVLLELARVLKPERLNE
ECCCCCEEEEECCCCHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
EVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA
EEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCH
LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHH
SASALEAVGRTLEEWLTKQ
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFN
CCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCC
GANAMEFAKVQMQWIPRDTGTPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIA
CCCHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEE
RRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGASGVAVLLELARVLKPERLNE
ECCCCCEEEEECCCCHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
EVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA
EEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCH
LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHH
SASALEAVGRTLEEWLTKQ
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA