| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yfbL [C]
Identifier: 159896536
GI number: 159896536
Start: 3605
End: 4564
Strand: Reverse
Name: yfbL [C]
Synonym: Haur_0003
Alternate gene names: 159896536
Gene position: 4564-3605 (Counterclockwise)
Preceding gene: 159896537
Following gene: 159896535
Centisome position: 0.07
GC content: 54.06
Gene sequence:
>960_bases ATGATCCAACGCCTTTGGTTCCAACGCTTGCTGCAACTTGGCCTGATCATCAGCCTAACTGGCTGTGGTGCAACGACTGG AACACCTGTTGCCAATCCAGTTCAAACAGTTGCCGCCACGAGTGCGCCGACGATTGTGCCCTTGCCCAAGCCTAGCCTAA CCGAAAGCCCCCAATTCAACGGGGCCAACGCCATGGAATTTGCCAAAGTTCAAATGCAATGGATTCCGCGCGATACGGGC ACACCAGGCTGGCAAGCTAACGGCGATTGGATTGTACAGACTTTGTTGGAATATGGCTGGGATGTTGAAGAACAATTTTT CAACGTGCCCGAAAATAAAAAAGGCCGCAATATTATCGCCCGCCGTGGCACTGGACCATTGGTCTTGCTTGGGGCGCACT ACGATGCTCGCCGTTACGCAGATAATGATCCCGACCCAACCAAGCGGATGCAGCCCGTACCAGCTGCCAACGATGGAGCC AGCGGCGTTGCGGTGCTGCTGGAATTGGCGCGGGTACTCAAGCCCGAACGGCTCAACGAGGAAGTTTGGTTGGTGTTTTT CGATGCCGAGGATAATGGTGGGATTGGCACATGGAACTGGACGCTTGGCTCAATCGACCTAGCTCCCAAGCTCGAAACCA CGCCCAAAGCTGTGGTGATCGTCGATATGATTGGCGATGCTGATCAACAGGTCTACCTGGAGCAAAGCTCAACGCCGGCT TTACGGGCCGAAATTTGGCAACAAGCCGCCGATTTGGGTTATACCACCTTCATTTCGGAAACCAAACACCATATTCTTGA TGATCATACCGCCTTCTTGCAACGCGGCTTTAGCGCCGCCGACCTAATCGACTTCGATTACCCGCATTGGCACACCACCA GCGATACGATCGATAAGCTCAGTGCCTCGGCACTAGAAGCAGTCGGTCGCACGCTCGAAGAGTGGCTCACCAAGCAGTAA
Upstream 100 bases:
>100_bases CGCATCATCACCCAGCATTTAGCTTCGATGAAGGCGTATTGCCCTTGGGCGTTGCCATTTTATGTGAAGCCGCAACCCGC TATCTCAACGGGAGCAACGA
Downstream 100 bases:
>100_bases ACCATCTCGCGTGTCAGCATCAATGAATGATCGGTGCTGACACGTAAACCTTCCCTAACCTCATAACACGCATCGCTGCA ACTCCTCGATTAATCTTGAT
Product: peptidase M28
Products: NA
Alternate protein names: Leucine Aminopeptidase; Glutamine Cyclotransferase-Related Protein; M28 Family Peptidase; Aminopeptidase; Glutaminyl Cyclase; M20/M25/M40 Family Peptidase
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFNGANAMEFAKVQMQWIPRDTG TPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIARRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGA SGVAVLLELARVLKPERLNEEVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKLSASALEAVGRTLEEWLTKQ
Sequences:
>Translated_319_residues MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFNGANAMEFAKVQMQWIPRDTG TPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIARRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGA SGVAVLLELARVLKPERLNEEVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKLSASALEAVGRTLEEWLTKQ >Mature_319_residues MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFNGANAMEFAKVQMQWIPRDTG TPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIARRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGA SGVAVLLELARVLKPERLNEEVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKLSASALEAVGRTLEEWLTKQ
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35293; Mature: 35293
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFN CCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCC GANAMEFAKVQMQWIPRDTGTPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIA CCCHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEE RRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGASGVAVLLELARVLKPERLNE ECCCCCEEEEECCCCHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC EVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA EEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCH LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHH SASALEAVGRTLEEWLTKQ HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIQRLWFQRLLQLGLIISLTGCGATTGTPVANPVQTVAATSAPTIVPLPKPSLTESPQFN CCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCC GANAMEFAKVQMQWIPRDTGTPGWQANGDWIVQTLLEYGWDVEEQFFNVPENKKGRNIIA CCCHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEE RRGTGPLVLLGAHYDARRYADNDPDPTKRMQPVPAANDGASGVAVLLELARVLKPERLNE ECCCCCEEEEECCCCHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC EVWLVFFDAEDNGGIGTWNWTLGSIDLAPKLETTPKAVVIVDMIGDADQQVYLEQSSTPA EEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCH LRAEIWQQAADLGYTTFISETKHHILDDHTAFLQRGFSAADLIDFDYPHWHTTSDTIDKL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCHHHHHHH SASALEAVGRTLEEWLTKQ HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA