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The map label for this gene is apl [H]

Identifier: 15928092

GI number: 15928092

Start: 2585890

End: 2586501

Strand: Direct

Name: apl [H]

Synonym: SA2301

Alternate gene names: 15928092

Gene position: 2585890-2586501 (Clockwise)

Preceding gene: 15928078

Following gene: 15928093

Centisome position: 91.87

GC content: 33.01

Gene sequence:

>612_bases
ATGGAACAAATTATCACTGAATTTATTAGTCGTTTTGGGTATGCAGCCATTTTTATATTAATTTTATTAGAAAATGTTTT
ACCTATCGTACCATCGGAAATTATTCTGACATTTGCTGGCCTTATGTCTGTTAAATCACATTTATCAATTTTAACCTTAT
TTATTATTGCAACCATCGCATCGTTTATAGGGCTGTTAATTTTATATTATATCTGCCGTTTGATTTCAGAAGAACGTCTA
TATCGTTTTATTGATCGACACGGTAAGTGGATTAAATTGAAAAGTAAGGATTTAAGGCGAGCAAATGATTGGTTTAAAAA
GTATGGCGTATGGGCTGTATTTATCTGTCGTTTCATACCTGTATTACGTGTATTGATTACCATTCCAGCCGGTGTAAACC
GCATGAATGTTGTGACATTTACCGTTATTTCATTAATAGGTACAACAATTTGGAATTTCGGTTTAATTTTACTAGGACGC
ACGTTGAGCGATAGCTTTGGTATGTTGATGACTGGTCTTCATACATATTCACGTATTATGTATGTTGTCATCATTATCGC
AGTCATTTACTTTGCTATACGTTACATTGGCAAACGTAAGAGAGTAAAATAA

Upstream 100 bases:

>100_bases
TGTTTCAACATCGCATACGACATCATTCATTATTCATTTGAATTTATCCAGTTTCTATTTGTCTGCAATTGCTGAAAATT
AAAGGAGCTTATTTTTAATA

Downstream 100 bases:

>100_bases
TATTGTTGTTAGTATAAAGGCATGAATTTTAAATTTCTATACACAAAAAGCAGTAAAATCATTCCATCTATTGAAATGAT
TCACTGCTTTTTTAAGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIASFIGLLILYYICRLISEERL
YRFIDRHGKWIKLKSKDLRRANDWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK

Sequences:

>Translated_203_residues
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIASFIGLLILYYICRLISEERL
YRFIDRHGKWIKLKSKDLRRANDWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK
>Mature_203_residues
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIASFIGLLILYYICRLISEERL
YRFIDRHGKWIKLKSKDLRRANDWFKKYGVWAVFICRFIPVLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGR
TLSDSFGMLMTGLHTYSRIMYVVIIIAVIYFAIRYIGKRKRVK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23461; Mature: 23461

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLRRANDWFKKYGVWAVFICRFIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGRTLSDSFGMLMTGLHTYSRIM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVIIIAVIYFAIRYIGKRKRVK
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQIITEFISRFGYAAIFILILLENVLPIVPSEIILTFAGLMSVKSHLSILTLFIIATIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIGLLILYYICRLISEERLYRFIDRHGKWIKLKSKDLRRANDWFKKYGVWAVFICRFIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRVLITIPAGVNRMNVVTFTVISLIGTTIWNFGLILLGRTLSDSFGMLMTGLHTYSRIM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVIIIAVIYFAIRYIGKRKRVK
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]