| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922982
Identifier: 15922982
GI number: 15922982
Start: 2680276
End: 2681001
Strand: Direct
Name: 15922982
Synonym: ST2638
Alternate gene names: NA
Gene position: 2680276-2681001 (Clockwise)
Preceding gene: 15922981
Following gene: 15922983
Centisome position: 99.46
GC content: 41.74
Gene sequence:
>726_bases ATGATTTATTCTAAAGTTTTTTTAAAGCTTCACTGGGGTTTTTATGTTTCATACCCAGAAGCCTCTAAGGCTAAACCATC ATTCTACTTACCCCCTCCTACTACTCTTATAGGAGCATTAAGTTACGGAAAGTACAGGGGGGTTGACACAAAGGCTTTTA AGGGGAAAGCGGGAAGTCCAGCCCTAGAAATAAAGGTTAAGGCTGCAGCTTCTTTCAGCAACGAGTTTGTCGGGGGATAC ACTGAGGATATTATACGAAGCGTAATTATGTACTTTCAGAGGAAGGAAAGGAGGGGAGATCCTAAGTTTAGATACGGTGT AGTTCCTACCGGAAAAATTTACGCTCCTAACCAAGTAGTTAAGGTAGTCTATGTGGCTGAAATGGATAAAGAAGAACTGG AGAGATTAAGCTGGTCTATTACTAGGCTAGGTTGTAAGGAGTGTTTAGTAAGTGTGGAAGACGTAGAAATAGGTGAGGCT AAAAGGGTTAAGGGTAAAGTGAAGACATCTTACTATTTCCCAGCGAGTGTAACAATATCGGAGGAAGAAAAGAAGAATGT TATGTTAGTTAGTTTCTGGGATGAAAACGGTTTCATTTGGGGAAGTGCAGGAAACGTAGTGACATATGCACTCCCAGTTA CGGGATATCCGTTAAAGAGCAAGGAGGTTGAAGTAGAGGCTAGTGAGGCTTATGAGGTGGGAGGAGAATATGTTGTCTTC GGCTAA
Upstream 100 bases:
>100_bases AAAGTTTACGTAATAAATAACGAAGGGATCGAAGAGGGAGGAGAAGTAAATAAAGTTGGGAGTGTTGAAGAGCTAATTAC TTCTCTAACTGGGAAGTAAA
Downstream 100 bases:
>100_bases GAGTATAACTGATATTTATGAGGAGTTCATAAAGGATAACAGACTACAAGACAGATTAGCTATTAGACAAACTGTAGAGG AATTAGAAAAAGGACACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIYSKVFLKLHWGFYVSYPEASKAKPSFYLPPPTTLIGALSYGKYRGVDTKAFKGKAGSPALEIKVKAAASFSNEFVGGY TEDIIRSVIMYFQRKERRGDPKFRYGVVPTGKIYAPNQVVKVVYVAEMDKEELERLSWSITRLGCKECLVSVEDVEIGEA KRVKGKVKTSYYFPASVTISEEEKKNVMLVSFWDENGFIWGSAGNVVTYALPVTGYPLKSKEVEVEASEAYEVGGEYVVF G
Sequences:
>Translated_241_residues MIYSKVFLKLHWGFYVSYPEASKAKPSFYLPPPTTLIGALSYGKYRGVDTKAFKGKAGSPALEIKVKAAASFSNEFVGGY TEDIIRSVIMYFQRKERRGDPKFRYGVVPTGKIYAPNQVVKVVYVAEMDKEELERLSWSITRLGCKECLVSVEDVEIGEA KRVKGKVKTSYYFPASVTISEEEKKNVMLVSFWDENGFIWGSAGNVVTYALPVTGYPLKSKEVEVEASEAYEVGGEYVVF G >Mature_241_residues MIYSKVFLKLHWGFYVSYPEASKAKPSFYLPPPTTLIGALSYGKYRGVDTKAFKGKAGSPALEIKVKAAASFSNEFVGGY TEDIIRSVIMYFQRKERRGDPKFRYGVVPTGKIYAPNQVVKVVYVAEMDKEELERLSWSITRLGCKECLVSVEDVEIGEA KRVKGKVKTSYYFPASVTISEEEKKNVMLVSFWDENGFIWGSAGNVVTYALPVTGYPLKSKEVEVEASEAYEVGGEYVVF G
Specific function: Unknown
COG id: COG1688
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26968; Mature: 26968
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSKVFLKLHWGFYVSYPEASKAKPSFYLPPPTTLIGALSYGKYRGVDTKAFKGKAGSP CCCCEEEEEEEEEEEEECCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCHHCCCCCCCC ALEIKVKAAASFSNEFVGGYTEDIIRSVIMYFQRKERRGDPKFRYGVVPTGKIYAPNQVV EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCEE KVVYVAEMDKEELERLSWSITRLGCKECLVSVEDVEIGEAKRVKGKVKTSYYFPASVTIS EEEEEECCCHHHHHHHHHHHHHHCHHHHCEEEECCCCCCCHHCCCEEEEEEEECEEEEEC EEEKKNVMLVSFWDENGFIWGSAGNVVTYALPVTGYPLKSKEVEVEASEAYEVGGEYVVF CCCCCCEEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCEEEEECHHHHHCCCCEEEE G C >Mature Secondary Structure MIYSKVFLKLHWGFYVSYPEASKAKPSFYLPPPTTLIGALSYGKYRGVDTKAFKGKAGSP CCCCEEEEEEEEEEEEECCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCHHCCCCCCCC ALEIKVKAAASFSNEFVGGYTEDIIRSVIMYFQRKERRGDPKFRYGVVPTGKIYAPNQVV EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCEE KVVYVAEMDKEELERLSWSITRLGCKECLVSVEDVEIGEAKRVKGKVKTSYYFPASVTIS EEEEEECCCHHHHHHHHHHHHHHCHHHHCEEEECCCCCCCHHCCCEEEEEEEECEEEEEC EEEKKNVMLVSFWDENGFIWGSAGNVVTYALPVTGYPLKSKEVEVEASEAYEVGGEYVVF CCCCCCEEEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCEEEEECHHHHHCCCCEEEE G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA