| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922751
Identifier: 15922751
GI number: 15922751
Start: 2423674
End: 2424060
Strand: Direct
Name: 15922751
Synonym: ST2419
Alternate gene names: NA
Gene position: 2423674-2424060 (Clockwise)
Preceding gene: 15922750
Following gene: 15922752
Centisome position: 89.94
GC content: 35.14
Gene sequence:
>387_bases ATGGATGGAATACCCCTCCTCTTCAAATACTCTGTTCCAGACAAACTGTATGAAAAATTCTGGGAAGGACTAAAGAAAGG TGAAATTTATACTACAAAGTGCAAGAAGTGTAATACTTTGTATTATCCTCCAAGGAAAGATTGTGAGAAATGTATGTCCT CAGATATGGAGTGGGTTAAACTTAGTAATGAGGGTATACTTATGACTTATAGTATTGTTAAGCAGAAACCTCAAGGATTT GAGAATTATAGTGATTATACTGTAGGGATTGCAAGAAATTCTGATGGTGCAAATCTAATGTGTTGGGTTAAAGGTGAAGC AAAAGTTGGTAAAAAAGTCAGATTAACAACAGACGGCCAAAGGGTTATTTGTGAGGTGATAAAATGA
Upstream 100 bases:
>100_bases GACCGGTACAACATTCTTTCAAAAGATATGTTGCTTTAACTCATAATGTTGGTGGTACGGGTCATTACGCTTACGTCATG ATATTTAATAGGTGATATAA
Downstream 100 bases:
>100_bases TCTTATACGATGAGACAGATCCAAAAGCATTAACAAAAGATGAAATAAAAGTAGTACAACAATTTAGATTTAGAAGGATG ATAAAAAGAGTATTAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MDGIPLLFKYSVPDKLYEKFWEGLKKGEIYTTKCKKCNTLYYPPRKDCEKCMSSDMEWVKLSNEGILMTYSIVKQKPQGF ENYSDYTVGIARNSDGANLMCWVKGEAKVGKKVRLTTDGQRVICEVIK
Sequences:
>Translated_128_residues MDGIPLLFKYSVPDKLYEKFWEGLKKGEIYTTKCKKCNTLYYPPRKDCEKCMSSDMEWVKLSNEGILMTYSIVKQKPQGF ENYSDYTVGIARNSDGANLMCWVKGEAKVGKKVRLTTDGQRVICEVIK >Mature_128_residues MDGIPLLFKYSVPDKLYEKFWEGLKKGEIYTTKCKKCNTLYYPPRKDCEKCMSSDMEWVKLSNEGILMTYSIVKQKPQGF ENYSDYTVGIARNSDGANLMCWVKGEAKVGKKVRLTTDGQRVICEVIK
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002878 - InterPro: IPR022002 [H]
Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]
EC number: NA
Molecular weight: Translated: 14742; Mature: 14742
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGIPLLFKYSVPDKLYEKFWEGLKKGEIYTTKCKKCNTLYYPPRKDCEKCMSSDMEWVK CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEE LSNEGILMTYSIVKQKPQGFENYSDYTVGIARNSDGANLMCWVKGEAKVGKKVRLTTDGQ ECCCCEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCH RVICEVIK HHHHEECC >Mature Secondary Structure MDGIPLLFKYSVPDKLYEKFWEGLKKGEIYTTKCKKCNTLYYPPRKDCEKCMSSDMEWVK CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEE LSNEGILMTYSIVKQKPQGFENYSDYTVGIARNSDGANLMCWVKGEAKVGKKVRLTTDGQ ECCCCEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCH RVICEVIK HHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]