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The map label for this gene is soxA [H]

Identifier: 15922726

GI number: 15922726

Start: 2397524

End: 2398063

Strand: Direct

Name: soxA [H]

Synonym: ST2395

Alternate gene names: 15922726

Gene position: 2397524-2398063 (Clockwise)

Preceding gene: 15922724

Following gene: 15922727

Centisome position: 88.97

GC content: 35.56

Gene sequence:

>540_bases
ATGAGTGAGCATAAAAGAGATTGGGAGAAAATATGGTTTATAGTAATGTTGATTCTGGTTGCTGCTTTTACTGGTTATAG
TTATTTTAGCATCATAAATGGTTCTGCTGCAACTTATAGATATGGTTTACCATTGGGAAGTGGTGTTCCTAAACCATTGC
CTAACGGAACTATAGTAATTTATATGTTAGGTGTACAATGGGCTTGGGAGCCTATGAATGCTACTGAAATAATTTATTTG
CCTAACGGGACCATGGAGAATATAAGTGTAACCTCTACAGTTATAACTTATGTTAATGGTTTTCCAGCTATTAAAGTTGA
GCCAGGACAACCAATACTATTAGTTCTTTATAGTAATAATGTAATGCACGCCTTCTATCTTAGACTACCTCATGGTCCAC
AGAATTGGAATATTGTACCAGGTGTTAACAGTTATGCTTTCTTTTATGCTCCAATGACTCCTGGTAATTACACGTTCCAT
TGTGCAGAGTATTGTGGTATTGGTCATTCTTATATGTATGGTTATTTGTGGGTGATGTAA

Upstream 100 bases:

>100_bases
TAGTTAAATGAATTATATTATTTAAAAGTAATATCATTCAATATCATTTATACTAAGAAAAACTTTTAAACCAATATATG
TATTTAAATTTTGAAGTAAG

Downstream 100 bases:

>100_bases
GATGGTGAAGTTATATCCTAAAACAAGTTTAGGTATGGCTTTAGTATATATTTCTGGAGCAATATCATGGCTTATTGTAA
TGGGAATTGCTGCTTTATGG

Product: quinol oxidase polypeptide II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Oxidase aa(3) subunit 2; Quinol oxidase polypeptide II [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSEHKRDWEKIWFIVMLILVAAFTGYSYFSIINGSAATYRYGLPLGSGVPKPLPNGTIVIYMLGVQWAWEPMNATEIIYL
PNGTMENISVTSTVITYVNGFPAIKVEPGQPILLVLYSNNVMHAFYLRLPHGPQNWNIVPGVNSYAFFYAPMTPGNYTFH
CAEYCGIGHSYMYGYLWVM

Sequences:

>Translated_179_residues
MSEHKRDWEKIWFIVMLILVAAFTGYSYFSIINGSAATYRYGLPLGSGVPKPLPNGTIVIYMLGVQWAWEPMNATEIIYL
PNGTMENISVTSTVITYVNGFPAIKVEPGQPILLVLYSNNVMHAFYLRLPHGPQNWNIVPGVNSYAFFYAPMTPGNYTFH
CAEYCGIGHSYMYGYLWVM
>Mature_178_residues
SEHKRDWEKIWFIVMLILVAAFTGYSYFSIINGSAATYRYGLPLGSGVPKPLPNGTIVIYMLGVQWAWEPMNATEIIYLP
NGTMENISVTSTVITYVNGFPAIKVEPGQPILLVLYSNNVMHAFYLRLPHGPQNWNIVPGVNSYAFFYAPMTPGNYTFHC
AEYCGIGHSYMYGYLWVM

Specific function: Subunit 2 transfers the electrons from caldariella quinol to the bimetallic center of the catalytic subunit 1 that is formed by heme A3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008972
- InterPro:   IPR002429 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: 1.9.3.-

Molecular weight: Translated: 20243; Mature: 20112

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHKRDWEKIWFIVMLILVAAFTGYSYFSIINGSAATYRYGLPLGSGVPKPLPNGTIVI
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEE
YMLGVQWAWEPMNATEIIYLPNGTMENISVTSTVITYVNGFPAIKVEPGQPILLVLYSNN
EEECCEEEECCCCCEEEEECCCCCCCCEEHHHEEEEHHCCCCEEEECCCCCEEEEEECCC
VMHAFYLRLPHGPQNWNIVPGVNSYAFFYAPMTPGNYTFHCAEYCGIGHSYMYGYLWVM
EEEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCCEEEEEHHHHCCCCHHEEEEEEEC
>Mature Secondary Structure 
SEHKRDWEKIWFIVMLILVAAFTGYSYFSIINGSAATYRYGLPLGSGVPKPLPNGTIVI
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEE
YMLGVQWAWEPMNATEIIYLPNGTMENISVTSTVITYVNGFPAIKVEPGQPILLVLYSNN
EEECCEEEECCCCCEEEEECCCCCCCCEEHHHEEEEHHCCCCEEEECCCCCEEEEEECCC
VMHAFYLRLPHGPQNWNIVPGVNSYAFFYAPMTPGNYTFHCAEYCGIGHSYMYGYLWVM
EEEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCCEEEEEHHHHCCCCHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1372250 [H]