| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is tyrA [H]
Identifier: 15922601
GI number: 15922601
Start: 2278892
End: 2279917
Strand: Direct
Name: tyrA [H]
Synonym: ST2270
Alternate gene names: 15922601
Gene position: 2278892-2279917 (Clockwise)
Preceding gene: 15922600
Following gene: 15922602
Centisome position: 84.57
GC content: 28.95
Gene sequence:
>1026_bases ATGAGTGCTGAAATTGATGAATTACGAAAAGAAATAGAAGCTATAGATAAACAAATATTAGAATTATTATCAAGAAGATT AAAAATTTCTGCTAAAATAGGAGAGATTAAGAGTAGAATAGGCAAAGATGTTACAGATGAGAAAAGAGAGCAGAAAGTCA GAGAGTATTGGTACAATTACGCTAGAAATTTAGGAATTCCAGATTCTATGGTAGAGAGTATTTTACCTATTTTATTTTCT TATTCAAAGATGGTTCAAATCAACCCTGGAAAAAAGAAAAACATTACAGTTATTGGATATGGTGGAATGGCAAGATCACT AATTTCTTTGTTCTCGTTAGTTGGTCATAATGTGGTCGTAACTGGTAGAAACAAAGAGAAAGCTGAAAGATTAGCTTCTG AATTTAAAGTAGTTTATATGGACTTAGATTCTGCCTTAAATTGGGGAGAGTACATAATTTTAGCCCTTTCTCCTTCTTCT TTTGATTACATTCTAAGAATTTCACCTAAATTCACAAGTAAAGTAGTAATGGATATTTTTTCTTCTAAAAATGAGATTTT TAAGGAATTAGAAAAATTATCTGAAATTTATTCTTTTAATTATATCTCTACTCATCCACTATTTGGTCCTATAACTTATC CAGTAGGAGAAAGAATAGTGATTATTCCTTCAAAAACATCCAAAAATGTTAATGAAATAGTAAACTTCTGGAGAGAATGT GGACTAAATACAACTGTTTCCACAGTTGAAGAACATGAAAAAGCCATGGCTATAGTACAAGTTTTAGCTCATTTTTACAT TTTAGGTTTACACAGGAGCATAGATGAATTAAGAAAGGAGTTAGGTATAGAAAATCTTTCCAATTTTTATACGACCAATT TTAAAGAATTAAATAAAATTATAGAAAAAGTAAGCAACATTCTTCCAGTAATTTTAGAAATACAAAAATCAAACCCTTAT GCTTATAAAGTTAGAGATATAGGAGTAAACGAATTACAAAAAATAAAAGAAGAATTGGGTGGTTAA
Upstream 100 bases:
>100_bases TACCTTTGGAAGATCTGCTAGGAGCGAGAGAGATTTACTTGATTTCTATGGTATAAATTATAAGTCTATCTTAAATGCGG TTATGGAATTAGTGAAGTGA
Downstream 100 bases:
>100_bases ATGATTTTCATATTAAGAGAAAAAGCGGATTATTCTGTATTAAGAGAAAAATTACAAGATTCATCTGCCTCTTATAAGTT TCTAGATCTTTATGGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSAEIDELRKEIEAIDKQILELLSRRLKISAKIGEIKSRIGKDVTDEKREQKVREYWYNYARNLGIPDSMVESILPILFS YSKMVQINPGKKKNITVIGYGGMARSLISLFSLVGHNVVVTGRNKEKAERLASEFKVVYMDLDSALNWGEYIILALSPSS FDYILRISPKFTSKVVMDIFSSKNEIFKELEKLSEIYSFNYISTHPLFGPITYPVGERIVIIPSKTSKNVNEIVNFWREC GLNTTVSTVEEHEKAMAIVQVLAHFYILGLHRSIDELRKELGIENLSNFYTTNFKELNKIIEKVSNILPVILEIQKSNPY AYKVRDIGVNELQKIKEELGG
Sequences:
>Translated_341_residues MSAEIDELRKEIEAIDKQILELLSRRLKISAKIGEIKSRIGKDVTDEKREQKVREYWYNYARNLGIPDSMVESILPILFS YSKMVQINPGKKKNITVIGYGGMARSLISLFSLVGHNVVVTGRNKEKAERLASEFKVVYMDLDSALNWGEYIILALSPSS FDYILRISPKFTSKVVMDIFSSKNEIFKELEKLSEIYSFNYISTHPLFGPITYPVGERIVIIPSKTSKNVNEIVNFWREC GLNTTVSTVEEHEKAMAIVQVLAHFYILGLHRSIDELRKELGIENLSNFYTTNFKELNKIIEKVSNILPVILEIQKSNPY AYKVRDIGVNELQKIKEELGG >Mature_340_residues SAEIDELRKEIEAIDKQILELLSRRLKISAKIGEIKSRIGKDVTDEKREQKVREYWYNYARNLGIPDSMVESILPILFSY SKMVQINPGKKKNITVIGYGGMARSLISLFSLVGHNVVVTGRNKEKAERLASEFKVVYMDLDSALNWGEYIILALSPSSF DYILRISPKFTSKVVMDIFSSKNEIFKELEKLSEIYSFNYISTHPLFGPITYPVGERIVIIPSKTSKNVNEIVNFWRECG LNTTVSTVEEHEKAMAIVQVLAHFYILGLHRSIDELRKELGIENLSNFYTTNFKELNKIIEKVSNILPVILEIQKSNPYA YKVRDIGVNELQKIKEELGG
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=285, Percent_Identity=25.9649122807018, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 39053; Mature: 38922
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEIDELRKEIEAIDKQILELLSRRLKISAKIGEIKSRIGKDVTDEKREQKVREYWYNY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ARNLGIPDSMVESILPILFSYSKMVQINPGKKKNITVIGYGGMARSLISLFSLVGHNVVV HHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEE TGRNKEKAERLASEFKVVYMDLDSALNWGEYIILALSPSSFDYILRISPKFTSKVVMDIF ECCCHHHHHHHHHHHEEEEEEHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHH SSKNEIFKELEKLSEIYSFNYISTHPLFGPITYPVGERIVIIPSKTSKNVNEIVNFWREC HCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHC GLNTTVSTVEEHEKAMAIVQVLAHFYILGLHRSIDELRKELGIENLSNFYTTNFKELNKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH IEKVSNILPVILEIQKSNPYAYKVRDIGVNELQKIKEELGG HHHHHHHHHHHEEEECCCCEEEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure SAEIDELRKEIEAIDKQILELLSRRLKISAKIGEIKSRIGKDVTDEKREQKVREYWYNY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ARNLGIPDSMVESILPILFSYSKMVQINPGKKKNITVIGYGGMARSLISLFSLVGHNVVV HHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEE TGRNKEKAERLASEFKVVYMDLDSALNWGEYIILALSPSSFDYILRISPKFTSKVVMDIF ECCCHHHHHHHHHHHEEEEEEHHHCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHH SSKNEIFKELEKLSEIYSFNYISTHPLFGPITYPVGERIVIIPSKTSKNVNEIVNFWREC HCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHC GLNTTVSTVEEHEKAMAIVQVLAHFYILGLHRSIDELRKELGIENLSNFYTTNFKELNKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH IEKVSNILPVILEIQKSNPYAYKVRDIGVNELQKIKEELGG HHHHHHHHHHHEEEECCCCEEEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1512561 [H]