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The map label for this gene is 15922549

Identifier: 15922549

GI number: 15922549

Start: 2227669

End: 2228166

Strand: Direct

Name: 15922549

Synonym: ST2221

Alternate gene names: NA

Gene position: 2227669-2228166 (Clockwise)

Preceding gene: 15922548

Following gene: 15922550

Centisome position: 82.67

GC content: 31.73

Gene sequence:

>498_bases
ATGTCCCTGATGAGTGATTTTCAAGTTTCATTTTTTGTATTTTTTGGAATAATAAGTATTGCTTCTGCACTGTTTATAAC
TAGGCAAAAGAACGTATTTTATGCAGCGATAGGTCTAATATTTTTAGGAATATCCGTTGCTGCTATGATAGCGTTAATTA
ATTTTGCTTACTCGTTTTATTCAGCATTTCATATTTTACTCTATGTTGGTTCAACTGTAGTGTTTTTAGCAATTTCTCTA
GTAATGTTTAGAGGGTTAAATGTTAAAGAGGTTAAAATAAGTTGGGCTCCTATAATAGCGTTGCTTGTTGGTGTTTTCGT
ATTTATTGATATATTTGCTACTTTCTCTAGTATAACACCAGTCTCAACATTAGAGGTCTTTAGTTTACAAACTTTAGCTA
ATGAAATTTTACAAAACTATTGGTTCCCAGCACTTATCTTAATAATAGCACTTTTAACAACCATGATTGAGGCTATATCT
CTCGCACGGAGGGATTAA

Upstream 100 bases:

>100_bases
AGACCAGATAGGTTCGATCAAGATTTTGATCAACCGATACCTTCTCAAGGTATAGTGAAAAAAGTTAGAGCTGTTGTTGA
CGAAAAGAAGGGGATCAAAT

Downstream 100 bases:

>100_bases
TATGATTCTTCCTTACTTTGGTTTGGTTATAGGTATAATCCTTGGAAGTATAGGAGTATATGGATTGCTAAATAGTAAAA
ATATAGTAAGAATACTTCTG

Product: NADH-plastoquinone oxidoreductase subunit 6

Products: NAD+; ubiquinol

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSLMSDFQVSFFVFFGIISIASALFITRQKNVFYAAIGLIFLGISVAAMIALINFAYSFYSAFHILLYVGSTVVFLAISL
VMFRGLNVKEVKISWAPIIALLVGVFVFIDIFATFSSITPVSTLEVFSLQTLANEILQNYWFPALILIIALLTTMIEAIS
LARRD

Sequences:

>Translated_165_residues
MSLMSDFQVSFFVFFGIISIASALFITRQKNVFYAAIGLIFLGISVAAMIALINFAYSFYSAFHILLYVGSTVVFLAISL
VMFRGLNVKEVKISWAPIIALLVGVFVFIDIFATFSSITPVSTLEVFSLQTLANEILQNYWFPALILIIALLTTMIEAIS
LARRD
>Mature_164_residues
SLMSDFQVSFFVFFGIISIASALFITRQKNVFYAAIGLIFLGISVAAMIALINFAYSFYSAFHILLYVGSTVVFLAISLV
MFRGLNVKEVKISWAPIIALLVGVFVFIDIFATFSSITPVSTLEVFSLQTLANEILQNYWFPALILIIALLTTMIEAISL
ARRD

Specific function: Unknown

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3

Molecular weight: Translated: 18331; Mature: 18200

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMSDFQVSFFVFFGIISIASALFITRQKNVFYAAIGLIFLGISVAAMIALINFAYSFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFHILLYVGSTVVFLAISLVMFRGLNVKEVKISWAPIIALLVGVFVFIDIFATFSSITP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSTLEVFSLQTLANEILQNYWFPALILIIALLTTMIEAISLARRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLMSDFQVSFFVFFGIISIASALFITRQKNVFYAAIGLIFLGISVAAMIALINFAYSFY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFHILLYVGSTVVFLAISLVMFRGLNVKEVKISWAPIIALLVGVFVFIDIFATFSSITP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSTLEVFSLQTLANEILQNYWFPALILIIALLTTMIEAISLARRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA