Click here to switch to the map view.

The map label for this gene is sgcQ [C]

Identifier: 15922481

GI number: 15922481

Start: 2152968

End: 2153720

Strand: Direct

Name: sgcQ [C]

Synonym: ST2156

Alternate gene names: 15922481

Gene position: 2152968-2153720 (Clockwise)

Preceding gene: 15922479

Following gene: 15922482

Centisome position: 79.89

GC content: 34.66

Gene sequence:

>753_bases
ATGAAGCTAATAGGAGTTGTTCATTTACCACCATTACCTGGATCGTTTTTCTACAAAGGCGAATTTGAGGAAATAGTAGA
CTTTGCAATAAATGAGTCAAAGAAACTTGAAGTAGGGGGATTTGATGCAGTAATATTAGAAAATTTTAATGATAAACCAT
TTAGAAAAAAAGTAAGAGTTGAGACAGCAATCGCTATGAGTATAATAGCTAGAGAGGTAAAAAAATCTACCAGTTTACTC
GTGGGTATAAATCTTTTACGCAATTCCGCTTATGAAGCAGCAAGTATTGCGAGTTTAACTGGAGATTTTATAAGAGTTAA
TGCATTATGCGAAACAATATCTTCCCCTGAAGGGATAATTGAACCAGCGTCAGTAGAAGTTCAAGAGGTACTCTACTATA
CAAAGAGGAAAATCTCTATCTTAGCTGACATAAATGTAAAACATGCTAGCCCTTTACATCAAATGAACTTAGAAAGCTTA
CTATTGGATTGTAAAGAAAGAGGATTTGCTGACTATATAATCGTAACTGGGGAAAGAACAGGCAAAGAACCAAACCCAGA
AGTTGTAAAAATGATAAAGAATATCTCTCCACTGCCAGTATGTGTAGGAAGTGGAATGACCCCAAATAATATTAGAGATT
ACAAAGTGGACTGTTTTATAATTGGGACATATTTAAAGGACACTGATGGTAAAATAAGGGTAGAAAGAGTGAAAGAAATT
GCAAACGCGGTTAAGAGTATACATAACAGGTGA

Upstream 100 bases:

>100_bases
CACCATTCTTTAGAAAACTTAAACATGCTAACGGTCATATAAACATAGTTTGACAACTTGTTCACAAAGGTATATATTTT
CACCAAAATAAATAAACCTA

Downstream 100 bases:

>100_bases
GCCCGGAGTAGGAAAAACGACAATTTTTCTTAAAGTAATTGATAAACTCAAATCACAAGGATACTCTATCTCAGGCTTTT
ATTGTCCAGAAGTGAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKLIGVVHLPPLPGSFFYKGEFEEIVDFAINESKKLEVGGFDAVILENFNDKPFRKKVRVETAIAMSIIAREVKKSTSLL
VGINLLRNSAYEAASIASLTGDFIRVNALCETISSPEGIIEPASVEVQEVLYYTKRKISILADINVKHASPLHQMNLESL
LLDCKERGFADYIIVTGERTGKEPNPEVVKMIKNISPLPVCVGSGMTPNNIRDYKVDCFIIGTYLKDTDGKIRVERVKEI
ANAVKSIHNR

Sequences:

>Translated_250_residues
MKLIGVVHLPPLPGSFFYKGEFEEIVDFAINESKKLEVGGFDAVILENFNDKPFRKKVRVETAIAMSIIAREVKKSTSLL
VGINLLRNSAYEAASIASLTGDFIRVNALCETISSPEGIIEPASVEVQEVLYYTKRKISILADINVKHASPLHQMNLESL
LLDCKERGFADYIIVTGERTGKEPNPEVVKMIKNISPLPVCVGSGMTPNNIRDYKVDCFIIGTYLKDTDGKIRVERVKEI
ANAVKSIHNR
>Mature_250_residues
MKLIGVVHLPPLPGSFFYKGEFEEIVDFAINESKKLEVGGFDAVILENFNDKPFRKKVRVETAIAMSIIAREVKKSTSLL
VGINLLRNSAYEAASIASLTGDFIRVNALCETISSPEGIIEPASVEVQEVLYYTKRKISILADINVKHASPLHQMNLESL
LLDCKERGFADYIIVTGERTGKEPNPEVVKMIKNISPLPVCVGSGMTPNNIRDYKVDCFIIGTYLKDTDGKIRVERVKEI
ANAVKSIHNR

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Caenorhabditis elegans, GI115532828, Length=240, Percent_Identity=28.3333333333333, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24659916, Length=239, Percent_Identity=28.0334728033473, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 27782; Mature: 27782

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIGVVHLPPLPGSFFYKGEFEEIVDFAINESKKLEVGGFDAVILENFNDKPFRKKVRV
CCEEEEEECCCCCCCCEECCCHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHHH
ETAIAMSIIAREVKKSTSLLVGINLLRNSAYEAASIASLTGDFIRVNALCETISSPEGII
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
EPASVEVQEVLYYTKRKISILADINVKHASPLHQMNLESLLLDCKERGFADYIIVTGERT
CCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHCHHHHHHHHHHCCCEEEEEEECCCC
GKEPNPEVVKMIKNISPLPVCVGSGMTPNNIRDYKVDCFIIGTYLKDTDGKIRVERVKEI
CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCEEHHHHHHH
ANAVKSIHNR
HHHHHHHHCC
>Mature Secondary Structure
MKLIGVVHLPPLPGSFFYKGEFEEIVDFAINESKKLEVGGFDAVILENFNDKPFRKKVRV
CCEEEEEECCCCCCCCEECCCHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHHH
ETAIAMSIIAREVKKSTSLLVGINLLRNSAYEAASIASLTGDFIRVNALCETISSPEGII
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
EPASVEVQEVLYYTKRKISILADINVKHASPLHQMNLESLLLDCKERGFADYIIVTGERT
CCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHCHHHHHHHHHHCCCEEEEEEECCCC
GKEPNPEVVKMIKNISPLPVCVGSGMTPNNIRDYKVDCFIIGTYLKDTDGKIRVERVKEI
CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEEECCCCCEEHHHHHHH
ANAVKSIHNR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]